Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3122 ATGGGTTCTCTCGGAATTGAAAGCTCCAAACCGGAGGTTGTTACCATTGATGTGGTTGCTGCCAAGGGTCTGATCCAGACCACCCATGTTTATCTGGATGTCAGGACGGTGGAAGAGTTTGAGAAAGGACATGTGGATACAGTGAAGATGATTAACATTCCTTACATGTTCAATACACCGGAAGTGAGATCTCTGTACGCAACTGCTGATCTCCTGGCTGAAGGCTTTAAGGATGTGAGCAACATGGGAGGTGGTTATGTGGACTGGCTTAAAAATGAATTTCCAGTGAAGGCATCTTTAGCAAAAACGGAGTATGAATTTCCAGTGAAGGTGGAGGCATCTTTAGCAAAACCGAGCCTTGATCAGTTATAA 372 0.4462 MGSLGIESSKPEVVTIDVVAAKGLIQTTHVYLDVRTVEEFEKGHVDTVKMINIPYMFNTPEVRSLYATADLLAEGFKDVSNMGGGYVDWLKNEFPVKASLAKTEYEFPVKVEASLAKPSLDQL* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3122 123 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 62 IPR044684 GO:0003824
Lja4g3122 123 PANTHER THIOSULFATE SULFURTRANSFERASE 18 62 101 - -
Lja4g3122 123 Gene3D - 6 58 IPR036873 -
Lja4g3122 123 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 96 IPR036873 -
Lja4g3122 123 CDD RHOD 30 89 - -
Lja4g3122 123 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 62 - -
Lja4g3122 123 Gene3D - 59 120 IPR036873 -
Lja4g3122 123 ProSiteProfiles Rhodanese domain profile. 29 98 IPR001763 -
Lja4g3122 123 PANTHER THIOSULFATE SULFURTRANSFERASE 18 62 101 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3122 Lja-Chr4 59143689 59146604 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3122 3 108 Sulfurtransferasese or Rhodanese AT5G66170 38.519 6.49e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3122 - K15692 gmx:100792251 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0561 2 5082267 5084905 Lja4g3122 4 59143689 59146604 PCT
Lja4g3120 4 59068588 59071691 Lja4g3122 4 59143689 59146604 PCT