Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3120 ATGGGTTCTCTCGGAATTGAAAGCTCCAAACCAGAGGTTGTTACCGTTGATGTGGTTGCTGCCAAGGGTCTGATCCAGACCACCCATGTTTATCTGGATGTCAGGACGGTGGAAGAGTTTGAGAAAGGACATGTGGATACAGTGAAGATTATTAACATTCCTTACATGTTCAATACACCGGAAGGCAGGGTGAAGAACCAAGAGTTTCGGAAGGAGCTTTTATCTGCTTGCAAGAAAGAAGATCACGTCATCGTGGGTTGCCAAAGTGGAGTGAGATCTCTGTACGCAACTGCTGATCTTCTGGCTGAAGGCTTTAAGGATGTGAGCAACATGGGAGGTGGTTATGTGGACTGGCTTAAAAATGAATTTCCAGTGAAGGCATCTTTAGCAAAAACGAAGTATGAATTTCCAGTGAAGGTGGAGGCATCTTTAGCAAAACCGAGCCTTGATCAGTTATAA 459 0.4466 MGSLGIESSKPEVVTVDVVAAKGLIQTTHVYLDVRTVEEFEKGHVDTVKIINIPYMFNTPEGRVKNQEFRKELLSACKKEDHVIVGCQSGVRSLYATADLLAEGFKDVSNMGGGYVDWLKNEFPVKASLAKTKYEFPVKVEASLAKPSLDQL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3120 152 Gene3D - 6 127 IPR036873 -
Lja4g3120 152 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 129 - -
Lja4g3120 152 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Lja4g3120 152 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 129 IPR044684 GO:0003824
Lja4g3120 152 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 125 IPR036873 -
Lja4g3120 152 Pfam Rhodanese-like domain 28 120 IPR001763 -
Lja4g3120 152 SMART rhod_4 16 124 IPR001763 -
Lja4g3120 152 CDD RHOD 30 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3120 Lja-Chr4 59068588 59071691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3120 3 126 Sulfurtransferasese or Rhodanese AT5G66170 53.226 9.02e-48 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3120 - K15692 gmx:100792251 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3120 4 59068588 59071691 Lja4g3120 4 59068588 59071691 ECH
Lja4g3120 4 59068588 59071691 Lja4g3122 4 59143689 59146604 PCT