Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3107 ATGAAGCCTCTCTTTCAATGTGCTATATTCATTTGTTTGTGTTCTGCCAGAGCCTTCATCTTTCAACATGTTTCTGCTGTGAGTCTCCCAAACAATAAAACAGTGCCAGCAGTGTTTGTATTTGGGGACTCTATAGTAGATACTGGAAACAACAACTACATGACCACTCTTGTTAAATGCAATTTCACACCATATGGTAGAGATTTTGCTGGGGGAAATCATCCAACTGGGAGGTTCAGCAATGGTTTAGTCCCTTCAGACATCATTGCTGCAAAGTTTGGAGTCAAGAAGCTTCTACCTCCTTATCTTGATCCAAATTTGCAACTTCAAGATCTCCTCACTGGAGTAACCTTTGCCTCAGGTGGTGCTGGGTATGATCCTCTAACAGCTATATTAGTGTCAGTGAAATCATTATCAGATCAATTAGACATGTTCAAGGGGTATATTAAGAAGATACAAGAAGCAGTTGGAAGCAACAGAACAGCAATGATAGTGTCTAAAAGCATATACATAGTGTGCTCAGGAAGTGATGACATTGCCAATACATATGCTGAAACGCCATTTAGGAGATTCAAGTATGATATTCCATCATATACCGACTTTATGGCTTCAGAAGCCTCAAAATTCTTGCAGGAACTTTATGGATTAGGAGCTAGAAGGATTGGAGTATTCAGTGTACCAGTTGTAGGGTGTGTGCCTGCACAAAGAACAATTGGTGGAGGCAAGCACAGAGCATGTGTAAACTCTTCCAACCAAGCAGCAGTACTCTTCAACTCCAAGCTCTCTTCTCAAATTGATCAACTTGCAAAAAAGTTTTCAGATGCTAGGCTTGTGTATCTTGAATCTTACTACCCATTTCTGGACATCATTCAAAATCCTGCTAAATATGGTTTTAAAGAAACAGAGAAAGGATGTTGTGGAACTGGGTATATAGAAGGCGCCATTTTGTGTAACCCTTATACCAGAAACTCATGCTCAAATACTTCCGACCATGTATTCTGGGACAGTTATCATCCTTCAGAAAAGGCTTATTATGCACTTAGTTCTCTAGTGCTTGAGAACAAAATGAAGGACTTCTTCTGA 1083 0.3989 MKPLFQCAIFICLCSARAFIFQHVSAVSLPNNKTVPAVFVFGDSIVDTGNNNYMTTLVKCNFTPYGRDFAGGNHPTGRFSNGLVPSDIIAAKFGVKKLLPPYLDPNLQLQDLLTGVTFASGGAGYDPLTAILVSVKSLSDQLDMFKGYIKKIQEAVGSNRTAMIVSKSIYIVCSGSDDIANTYAETPFRRFKYDIPSYTDFMASEASKFLQELYGLGARRIGVFSVPVVGCVPAQRTIGGGKHRACVNSSNQAAVLFNSKLSSQIDQLAKKFSDARLVYLESYYPFLDIIQNPAKYGFKETEKGCCGTGYIEGAILCNPYTRNSCSNTSDHVFWDSYHPSEKAYYALSSLVLENKMKDFF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3107 360 CDD SGNH_plant_lipase_like 36 352 IPR035669 -
Lja4g3107 360 SUPERFAMILY SGNH hydrolase 37 353 - -
Lja4g3107 360 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 359 - -
Lja4g3107 360 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 38 49 IPR008265 GO:0006629|GO:0016298
Lja4g3107 360 Pfam GDSL-like Lipase/Acylhydrolase 38 350 IPR001087 GO:0016788
Lja4g3107 360 Gene3D SGNH hydrolase 23 356 IPR036514 -
Lja4g3107 360 PANTHER GDSL ESTERASE/LIPASE EXL3 4 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3107 Lja-Chr4 58775356 58795437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3107 32 354 Pollen Coat Proteome AT1G75910 40.184 1.94e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3107 - - ahf:112723705 560.451