Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3104 ATGGATTGCAACAAAGATGAGGCAGCTAGGGCCAAGGAAATAGCTGAGAAGAAATTTTCTCTAAGGGAATATGCTGGTGCAAAAAAGTTTGCTCTCAAGGCTCGGAATTTGTATCCTGCACTGGAGGGTCTTCCCCAGTTTCTGTCAATTCTGAATGTTTATATCTCTGCTGAGAATAAAATAAATGGACAAATGGATTGGTATGGTATACTTGGAGTGGATCCCTTTGCTGCTGAGGAGACAATTAGAAAGCAATACAAGGTATTGGCTCTCAGTCTTCACCCTGACAAAAATAGGTCTTTAGGTGCAGAGGGTGCATTTAAGCTTGTTTCAGAGGCATGGAGCTTACTATCTGATAAGGTCAAGAGACTAGCATACAACAACATCAGGGGTTTGGGTGGACTTCAGCATAATGCTCGCAACCATGTTGGGGCTCAATCCAAAGCACCCAGTTCAAGTGGTTCTAATAATCCTAAGAAGAATGCAACCTCAGATGGGAGAACTGGAAATAATAATGCCCGGGCACCACCTTCACCCTCCATTCCTCGTCCACATGAAATGCCGGCTTCCTTTTGGACTGTGTGTAGGTGCAAGGTACATTTTGAGTATCCCAGGGTTTATTTGAATCAAACTCTCCTATGTCCCAATTGTAAGGAAGCTTTTAAGGCTATAGAGAAGAGTCCGCCTCCTAATGCTGTTAAGTCATCTTATTCGGCTTCTCGGCAACATGATCAGAAGTCTCAACATCATGCTGGAAAGAATCACCCCATCAATCCGGGAAGAACTTCTGCAGTTTCTCAAGACAAGAAATCCAGCAGTTCTGCGGGCATTTCTTCTTTTAACAATATAAACTTCCAGCGTGGTTCTCACTCGAGAATGCCTGGTTTTGTTGGTGCTGATGGATCTTCGTCTGTTACTGCTGCAAGTTTTAAGCAGCATTCAGGCGAGAAAAGAAAATTTGAAGGAGCTGCATCAATTACTTCGCGGGAGAAGAATCACCCCATCAATCTGGGAAGAACTTCTGCCGTTTCTCAAGACAAGAAATCCAGCAGTTCTGCAGGCATGCCTTCTGCAGTGTCAATTCGTACTTAA 1092 0.4386 MDCNKDEAARAKEIAEKKFSLREYAGAKKFALKARNLYPALEGLPQFLSILNVYISAENKINGQMDWYGILGVDPFAAEETIRKQYKVLALSLHPDKNRSLGAEGAFKLVSEAWSLLSDKVKRLAYNNIRGLGGLQHNARNHVGAQSKAPSSSGSNNPKKNATSDGRTGNNNARAPPSPSIPRPHEMPASFWTVCRCKVHFEYPRVYLNQTLLCPNCKEAFKAIEKSPPPNAVKSSYSASRQHDQKSQHHAGKNHPINPGRTSAVSQDKKSSSSAGISSFNNINFQRGSHSRMPGFVGADGSSSVTAASFKQHSGEKRKFEGAASITSREKNHPINLGRTSAVSQDKKSSSSAGMPSAVSIRT* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3104 363 PANTHER HEAT SHOCK PROTEIN-LIKE 1 346 - -
Lja4g3104 363 MobiDBLite consensus disorder prediction 226 363 - -
Lja4g3104 363 Pfam DnaJ domain 66 127 IPR001623 -
Lja4g3104 363 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lja4g3104 363 MobiDBLite consensus disorder prediction 140 176 - -
Lja4g3104 363 MobiDBLite consensus disorder prediction 312 326 - -
Lja4g3104 363 SUPERFAMILY Chaperone J-domain 56 129 IPR036869 -
Lja4g3104 363 CDD DnaJ 66 119 IPR001623 -
Lja4g3104 363 SMART dnaj_3 65 122 IPR001623 -
Lja4g3104 363 Gene3D DnaJ domain 63 174 IPR036869 -
Lja4g3104 363 PANTHER BNAC03G44070D PROTEIN 1 346 - -
Lja4g3104 363 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lja4g3104 363 MobiDBLite consensus disorder prediction 137 185 - -
Lja4g3104 363 MobiDBLite consensus disorder prediction 259 289 - -
Lja4g3104 363 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lja4g3104 363 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lja4g3104 363 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lja4g3104 363 MobiDBLite consensus disorder prediction 329 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3104 Lja-Chr4 58665554 58669270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3104 4 237 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 3.39e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3104 - - gmx:100792212 410.994