Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3087 ATGGGAGCATCTCACAAATGGTTAAGAATTGTTCGCAGCAAGTTCCTAAGATCATCCAACAAAGACAAAATAATCCTCCCTCCTCGTACGAGTGTTTGCACTAATCAAAGCGAGCTACCCATACTCAAAGATGTTGCAACCAACTCTACCACCACGGAAAACTTCACCAATTTGCCAATACCACCAACCTCTTCGGCCAGGACGTTCCCCAAAGAGCAGATTGCGGCAATTAGGATTCAAGCTTACTTCAGGGGTCATCTCGCAAGAAGAGCATATGGGGCTCTGAGAAGCCTGGTGAAGCTGCAAGCATTGGTTCGTGGGGTGTGTGTGAGGAGACAATCACGTATAGCGATGCAGTGTATGCACGCACTAGTTCGTTTACAAGTCAGGATTCGTGCAAGGCAGTTACTTGGTGGGATTGATTGA 426 0.4718 MGASHKWLRIVRSKFLRSSNKDKIILPPRTSVCTNQSELPILKDVATNSTTTENFTNLPIPPTSSARTFPKEQIAAIRIQAYFRGHLARRAYGALRSLVKLQALVRGVCVRRQSRIAMQCMHALVRLQVRIRARQLLGGID* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3087 141 ProSiteProfiles IQ motif profile. 96 123 IPR000048 GO:0005515
Lja4g3087 141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 116 IPR027417 -
Lja4g3087 141 PANTHER OS04G0561100 PROTEIN 2 138 - -
Lja4g3087 141 Pfam IQ calmodulin-binding motif 75 92 IPR000048 GO:0005515
Lja4g3087 141 ProSiteProfiles IQ motif profile. 72 100 IPR000048 GO:0005515
Lja4g3087 141 PANTHER IQ-DOMAIN 5-RELATED 2 138 - -
Lja4g3087 141 SMART iq_5 71 93 IPR000048 GO:0005515
Lja4g3087 141 SMART iq_5 94 115 IPR000048 GO:0005515
Lja4g3087 141 Gene3D - 70 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3087 Lja-Chr4 58450221 58450920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3087 64 138 IQD Protein Family AT3G51380 72.000 1.77e-32 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3087 - - cam:101507643 177.563