Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3075 ATGAAATTTCCTCCCATTTCCTTTCCCTTCCTTCTCCTCTCGCTCTTACTCTTCAGCTTCAGCACCGCTCATGATCACGCACCAAGCTCACACCTCACGCTTCTCCATGAAGAACGCGTCAGCGCACTTTCTCGACCCTCATCCCGTTCTCTTCTCTCAATTCCTCCTAAGCCAGCAGCTACGGCGCTGATTGCCACACTGGATGGGACTATACATTTGGTGGAAAGACAGGAGAGTGGTTCCGTCAGTGTGATATGGTCATTCTCAACGGGTTCGCCAATATACAGTTCTCATCAAGCTCCTACCGACAAGGATGAGGGTCTAGAAAATGCATCTGCAGCAAAAGTTAGCGGACTTGTGGAATGCGGGGATGACTGGTCTTTGCACATGCACGACAAGCACTTTGGTAAAATGAGAATCACAGAATCTATTGCAGAATATGTAGCTCGTACACCTACCTTTTCAGATGATGGAGCAGTTACACTTGGATCCAAAAGAAGCACTTTATTTGAAGTTGATGCTAAAACTGGATCAATCGTTCAAGTTCATGCTATGTCTGGTTTTGATAATGCTTCTGCACCATGGAGTGATGACAGGCAGGATGTTACAAATATCCTCAGTGCAAAGAAAAAGGATCTTGCTGATCCAGTGAAACAAAATTCACGACAGCTGCTTCTCAAGATTTTTAGGACAGATTATTCTCTACAATCTGTTGGTCCCAACCCAGGAAGAGTTCTGTGGACTACAAAAGTAGCTGAATTTGAGGCTGTATTATTATGCCAACATACTTCATTTGATGTAGAAGATGAGTATGATTCTCACAGTGGCCTCAATTTTTCGATGCCATACCCTTGTCAAGAGATACAACAAGTCTTCCGCCTGAAAAAGAATTTTCTGTTAGAACCTTCAGTTGCTGGCAGATTGCCTAAGGCCTATCATGAAAATGATATGCTCTCAATGCCTACCTCAGATCCAATACTTCCTTTGCAGCTTGATAGATTTTTCAATGGTCATGATGGTGATTTGATGCTTCCTGCAGCTATGCCACATTCTTTGCCTTCTCGGCAACCAGAAATCAGCTTCCATGATAGTGATGATAATGCAGATGTGCTCCTTCATCCTCTCATGGAGATTAATATACCATGGGCAGTTTATTTGAGCAGGATGTCATTTCTATTACCATTAGTAATAGTTTTTCTGGGCTTTATTTTCTGTAGTCGTCTGAATAAGAATCAAGATATATTGAAGGATCAAAACAGCGAGTCTGAATTAAAAAGTTCACCTGCTAAGAAAAAGAGAACACGTAAGTCAGGAAAAAACAATGGCACTGTTGACAAAAAGGATAAACGTCTATCTTCAGAAGATGAGGATTTGGTGACACAAAAGGCTACTGGTGGAGAAGTGTGGCAGAACAGTAATCAAGTTGATGGAAGAAAAATTGGTAAATTACTTGTTTCAAATAAAGAAATTGCTAAAGGAAGCAATGGTACTATTGTTCTTGAGGGGATATATGAAGGTCGAGCTGTTGCTGTCAAACGTCTCGTCAAGGCTCATCATGATGTAGCTTCTAAAGAAATCCAAAATCTCATTGTGTCTGACCATCATCCAAACATTGTCCGATGGCATGGGGTGGAGTATGATCGCGATTTTGTTTATCTTTCTCTGGAACGTTGTACATGCAACTTAGGTGATTTGATTGAAATTTATTCAGATATATCAGAAATCCCCATGTTCAGGAAGGACCAAGCTTTTAGATGCTTGATAAGGGCACAAATGGAGACAGGGAAGGATAATACTCAAAATCTATGGAAATCAAACGGCTATCCATCACCTCTGCTACTAAAATTGATGAGGGATATTGTTTCTGGGGTTGTTCATTTGCATGAATTAGGAATTATACACCGAGATTTAAAACCGCAAAATGTTTTAATAATCAAGGAAAGATCCTTATGTGCAAAACTCTCAGATATGGGCATTAGCAAACGGCTTCTTAAAGATATGTCTTCTCTGGGTCATAATGCTACAGGTGGTGGGAGTTCAGGTTGGCAAGCACCAGAACAACTGGTTCAAGGCCGCCAAACACGGGCTGTAGATATATTTAGTTTAGGTTCTGTCCTCTTTTTCTGCTTGACTGGGGGAAGACATCCATTCGGAGAACATCTTGAGCGTGATGTCAATGTTGTGAAAAATCGAAAGGATCTTTTCTTAGTGGAGTTCATTCCTGAAGCTGAGGATCTTATCAGTTGTTTATTAAACCCTGACCCTAACCTAAGGCCAAAGGCGATTGAAGTATTGCACCATCCTTTTTTCTGGAGTTCTGAGATGAGACTTTCATTTTTACGTGACGCCAGTGACAAGGTGGAATTGGAAGGTAGAGAAAATGATTCGGATATGTTGAGGGCATTAGAAAGCATTGCCCCATTGGCCTTAGGGGGAAAATGGGATGAAAGGATGGAGCCAGCTTTCATTGCTAACATTGGTCATTACCGGCGATATAAGTTTAACAGTGTTCGAGACTTATTGCGGGTTATGAGAAACAAGCTAAATCATTATAGAGAATTGCCTCAAGAAATCCAGGAACTTGTAGGACCTGTTCCTGAAGGATTCAATGACTACTTTGCAAGTCGGTTTCCTAGACTCTTGATTGAAGTATATAAAGTTATATGTATATATTGCAAGGAGGAAGAATGTTTTCAGAGGTACTTTAACAATGTTGATTAG 2721 0.4094 MKFPPISFPFLLLSLLLFSFSTAHDHAPSSHLTLLHEERVSALSRPSSRSLLSIPPKPAATALIATLDGTIHLVERQESGSVSVIWSFSTGSPIYSSHQAPTDKDEGLENASAAKVSGLVECGDDWSLHMHDKHFGKMRITESIAEYVARTPTFSDDGAVTLGSKRSTLFEVDAKTGSIVQVHAMSGFDNASAPWSDDRQDVTNILSAKKKDLADPVKQNSRQLLLKIFRTDYSLQSVGPNPGRVLWTTKVAEFEAVLLCQHTSFDVEDEYDSHSGLNFSMPYPCQEIQQVFRLKKNFLLEPSVAGRLPKAYHENDMLSMPTSDPILPLQLDRFFNGHDGDLMLPAAMPHSLPSRQPEISFHDSDDNADVLLHPLMEINIPWAVYLSRMSFLLPLVIVFLGFIFCSRLNKNQDILKDQNSESELKSSPAKKKRTRKSGKNNGTVDKKDKRLSSEDEDLVTQKATGGEVWQNSNQVDGRKIGKLLVSNKEIAKGSNGTIVLEGIYEGRAVAVKRLVKAHHDVASKEIQNLIVSDHHPNIVRWHGVEYDRDFVYLSLERCTCNLGDLIEIYSDISEIPMFRKDQAFRCLIRAQMETGKDNTQNLWKSNGYPSPLLLKLMRDIVSGVVHLHELGIIHRDLKPQNVLIIKERSLCAKLSDMGISKRLLKDMSSLGHNATGGGSSGWQAPEQLVQGRQTRAVDIFSLGSVLFFCLTGGRHPFGEHLERDVNVVKNRKDLFLVEFIPEAEDLISCLLNPDPNLRPKAIEVLHHPFFWSSEMRLSFLRDASDKVELEGRENDSDMLRALESIAPLALGGKWDERMEPAFIANIGHYRRYKFNSVRDLLRVMRNKLNHYRELPQEIQELVGPVPEGFNDYFASRFPRLLIEVYKVICIYCKEEECFQRYFNNVD* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3075 906 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 12 902 - -
Lja4g3075 906 SMART PGNneu 835 889 - -
Lja4g3075 906 ProSiteProfiles Protein kinase domain profile. 484 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3075 906 SMART serkin_6 484 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3075 906 MobiDBLite consensus disorder prediction 418 463 - -
Lja4g3075 906 ProSiteProfiles KEN domain profile. 773 904 IPR010513 GO:0004540|GO:0006397
Lja4g3075 906 Gene3D KEN domain 773 906 IPR038357 -
Lja4g3075 906 Pfam Ribonuclease 2-5A 776 902 IPR010513 GO:0004540|GO:0006397
Lja4g3075 906 SUPERFAMILY Protein kinase-like (PK-like) 487 781 IPR011009 -
Lja4g3075 906 Gene3D Phosphorylase Kinase; domain 1 470 556 - -
Lja4g3075 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Lja4g3075 906 Gene3D Transferase(Phosphotransferase) domain 1 592 772 - -
Lja4g3075 906 MobiDBLite consensus disorder prediction 438 461 - -
Lja4g3075 906 CDD RNase_Ire1 774 902 - -
Lja4g3075 906 PANTHER IRE1-RELATED 12 902 IPR045133 GO:0004521|GO:0004674|GO:0030968
Lja4g3075 906 Gene3D - 56 265 IPR015943 GO:0005515
Lja4g3075 906 Pfam Protein kinase domain 487 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3075 Lja-Chr4 58261358 58270478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3075 510 769 MAP Kinase Kinase Kinase AT3G06030 25.758 4.08e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Lja4g3075 Pkinase 2.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3075 K08852 - gmx:100788389 1280