Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3073 ATGGCTACTACCACTCCTTCGCTGCTTCTACACTCATCTGGGTCTTCCTTTCTCGCTCAATTTCGTCCCTCTCCACCCCAATTCTCTCCTCACGGAATCCGCCATGGAAATGCGGTGGTGTCCGTGAAAGCCACGGCTGCTGGGGCTGTGCTTGTGGAGAAGTCTGAGGCGGAAACGGTCTTCAGGCTCAAGAGAACTTACACTGAGAAAGTTATTCCCAAGCTTGTAGAAGAGTTCTCTTACACCAACATTCACCAGGTTCCTAAAGTTAAGAAGATTGTGGTTAACTGCGGTATTGGAGAGGCTGCGCAGAATGCAAAAGGTTTGGATGCGGCAGTTAATGATCTAGCACTGATCACAGGGCAGAGACCTGTTAAGACTCGGGCTAGGACTTCTGTTGCCACCTTCAAGATCAGGGAAGGTCAACCGCTTGGGATTGCTGTGACACTCAGAGGAAAAGTGATGTACTCATTCCTAGATAGACTTGTCAACTTGGGATTTCCCAGGACAAGAGATTTCCAAGGTGTGAACACCAGCAGCTTTGATGGGCATGGGAATTTCAACATTGGCATTAAGGACCAGGGTGTGTTCCCAGAGATCAGATTTGATGTTGTTGGTAAGCCTAGAGGAATGGATGTCTGCATTGAAACAACGGCTGAAACTGATAAAGAAGCACAAAGGTTATTGGCTCTTCTGGGTATGCCATTCAGAGAGGGAGGTGGTTCTTCTGCCACCGCACTTCCCAAAAAGAAGCTGAAGTCTCATCATTTTGATCCAAAAGCAAAGGGAAAAGTTAGGAAGTGA 804 0.4764 MATTTPSLLLHSSGSSFLAQFRPSPPQFSPHGIRHGNAVVSVKATAAGAVLVEKSEAETVFRLKRTYTEKVIPKLVEEFSYTNIHQVPKVKKIVVNCGIGEAAQNAKGLDAAVNDLALITGQRPVKTRARTSVATFKIREGQPLGIAVTLRGKVMYSFLDRLVNLGFPRTRDFQGVNTSSFDGHGNFNIGIKDQGVFPEIRFDVVGKPRGMDVCIETTAETDKEAQRLLALLGMPFREGGGSSATALPKKKLKSHHFDPKAKGKVRK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3073 267 Gene3D - 54 238 IPR022803 -
Lja4g3073 267 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 57 238 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lja4g3073 267 Hamap 50S ribosomal protein L5 [rplE]. 60 238 IPR020930 GO:0003735|GO:0005840|GO:0006412
Lja4g3073 267 Pfam Ribosomal protein L5 83 139 IPR031310 -
Lja4g3073 267 SUPERFAMILY RL5-like 62 237 IPR022803 -
Lja4g3073 267 Pfam ribosomal L5P family C-terminus 143 236 IPR031309 -
Lja4g3073 267 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 57 238 - -
Lja4g3073 267 MobiDBLite consensus disorder prediction 249 267 - -
Lja4g3073 267 MobiDBLite consensus disorder prediction 240 267 - -
Lja4g3073 267 ProSitePatterns Ribosomal protein L5 signature. 116 132 IPR020929 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3073 89 237 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 27.152 1.16e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3073 K02931 - gmx:100818896 399.053