Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3063 ATGAAGACATTTAAGAAATCTCTCGCTATGATCACTCTATCTTTTTTGTTTCTTGTTCTCTGTGATGTGTCTCTGGCGAGAAACGTGAAGACCACGTCAAACCAGAACCAGAAGAGTACTTACATAGTACATGCTGCCAAATCACAAATGCCAGAAAGCTTTGATCACCACTCGGCTTGGTTTGAATCAATTTTGAAGTCAGTTTCTGACTCAGCAGAAATGATCTACACATATGACAAAGCTATTCATGGATTCTCAACAAGGTTAACACCAGAGGAAGCTCATTTTCTACAAAGTAGAGACGAGATTCTAAGGGTGATGCCAGATGAAATCTACAAGCTCCATACAACTCGAACCCCACTGTTCCTCGGGCTGGATAAAATCACTGCAAGCACATTCACCCAATCAAACATAGGACATAGTGATATCATCATTGGGGTTATAGACTCAGGTGTTTGGCCAGAGAGCAAGAGCTTCGACGACACCGGGTACGGACCCATCCCCAAAACCTGGAAAGGAAAATGCCAGATAGGTGCAAATTTCACAACCGCCAACTGTAACAAAAAACTAATTGGTGCCAGGTTCTATAATAGTGACCCAAATGATGAACATATATATTCTCTCTCTCCACGTGACGATACTGGTCATGGAAGCCACACTGCTAGCACTGTTGCAGGCTCTCCGGTGCAAAACACGAGCTTCTTCGGTTATGCTGCTGGAACGGCGCGTGGGATGGCCCCACGCGCTAGAGTTGCCATCTATAAGGTTTGCTGGAAGAATGGTTGTGCTACTTCCGACATATTGGCTGCGATAGACCAAGCCATCGTTGAAATCCTCGCAGTTGGAGCATTTTCGGCAATGGAGCATGGGATTGTTGTGTCTTGCGCCGGCGGGAACGATGGTCCTGCACCATCTTCTATCTCTAATACGGCACCTTGGATTATCACGGTAGGAGCTGGCACAATTGATCGGGATTTCTCTGCATATGTAAGCCTTGGAAATGGAAAAAACTATTCTGGTGTGTCTCTTTACAGTGGCAACAAATTGCCTGATAAACCTGTTTTGCCACTCATCTACGAGAAGACTGCGGGCATAGGAGAGAATTGTGAGCCAGAAAACTTGTCGCCGCAAAAAGTCAAGGGAAAGATTGTGGTGTGTGATCGCGGAATAGACGATAGGATGGAGAAAGCAGAGGCGGTGAAATCTGCAGGCGGTTTGGGCATGGTGTTGGCCAACGACGCAAAGAGGGAGGGGGATCTAAGGGCGGATCCATTTCTTTTCCCGGCACTTATGGTGGACGCAAAATCAGGCGAAGCCATCAAGAAGTATTGGATTTCTGATCCAAAACCGACATCAACGATTGTGTTTGAGGGGACAAAAGTCGGGATTGAGCCTTCCCCTTTGGTTGCGACGTTCAGCTCCAGGGGCCCAAATTCTATCACAAGAAAAATATTGAAGCCTGATTTGATTGCGCCAGGTGTCAACATCTTAGCTGCATTTACCAAGAACGCGAGTCCGAGTGCTCTAGATTCTGATGAAAGGCGAGTGGATTTTAACATCCTCTCAGGCACGTCCATGGCATGCCCTCACGTGAGCGGTATTGCAGCTTTGATTAAGGCGGCTCATCCTGACTGGAGTCCGGCCGTGATTCGGTCTGCGTTGATGACAACAGCTTATTCGACTTACAAGAATGGGACGCCGTTAGATTTTGGCGCAGGACATGTGGACCCTGTCCTTGCACTTAACCCAGGGCTTATTTATGATTTGACGGTGGATGATTATCTGAATTTTCTCTGTTCGATAGACTACACTCCTAGAATGATTGAACTCATCGCGAAGAGAAAATATGTGTGTGACGGAAAGGCACACTACTTTAATTACCCTTCATTTGTAGTGATTTTTTATGCTGCGCGGGTTAAACAAATGCGAACTCTCACCAATGTGGGTGCTGCAGGAACATACAAGGTATCTGTTCAGACAACTATCCCGGGTGTTAAGATCATAGTTGAACCAGAAGTGTTGAGCTTCGGAATAAATGAGAAAAAATCATATACTGTTACATTCACTACATCAGGTGTGAAGCAGAAACAAACTCAAGGTTTTGGACATTTAGAATGGTCTAATGGAAAGAACATTGTTCGAAGTCCTATTTTATTTAGTTGGGAACTATGA 2172 0.454 MKTFKKSLAMITLSFLFLVLCDVSLARNVKTTSNQNQKSTYIVHAAKSQMPESFDHHSAWFESILKSVSDSAEMIYTYDKAIHGFSTRLTPEEAHFLQSRDEILRVMPDEIYKLHTTRTPLFLGLDKITASTFTQSNIGHSDIIIGVIDSGVWPESKSFDDTGYGPIPKTWKGKCQIGANFTTANCNKKLIGARFYNSDPNDEHIYSLSPRDDTGHGSHTASTVAGSPVQNTSFFGYAAGTARGMAPRARVAIYKVCWKNGCATSDILAAIDQAIVEILAVGAFSAMEHGIVVSCAGGNDGPAPSSISNTAPWIITVGAGTIDRDFSAYVSLGNGKNYSGVSLYSGNKLPDKPVLPLIYEKTAGIGENCEPENLSPQKVKGKIVVCDRGIDDRMEKAEAVKSAGGLGMVLANDAKREGDLRADPFLFPALMVDAKSGEAIKKYWISDPKPTSTIVFEGTKVGIEPSPLVATFSSRGPNSITRKILKPDLIAPGVNILAAFTKNASPSALDSDERRVDFNILSGTSMACPHVSGIAALIKAAHPDWSPAVIRSALMTTAYSTYKNGTPLDFGAGHVDPVLALNPGLIYDLTVDDYLNFLCSIDYTPRMIELIAKRKYVCDGKAHYFNYPSFVVIFYAARVKQMRTLTNVGAAGTYKVSVQTTIPGVKIIVEPEVLSFGINEKKSYTVTFTTSGVKQKQTQGFGHLEWSNGKNIVRSPILFSWEL* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3063 723 Pfam Peptidase inhibitor I9 40 115 IPR010259 -
Lja4g3063 723 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 28 721 - -
Lja4g3063 723 SUPERFAMILY PA domain 363 433 IPR046450 -
Lja4g3063 723 MobiDBLite consensus disorder prediction 206 225 - -
Lja4g3063 723 Pfam PA domain 363 440 IPR003137 -
Lja4g3063 723 SUPERFAMILY Subtilisin-like 114 585 IPR036852 GO:0004252|GO:0006508
Lja4g3063 723 Gene3D - 598 721 - -
Lja4g3063 723 Gene3D Peptidase S8/S53 domain 279 594 IPR036852 GO:0004252|GO:0006508
Lja4g3063 723 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 115 IPR037045 -
Lja4g3063 723 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Lja4g3063 723 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Lja4g3063 723 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Lja4g3063 723 CDD Peptidases_S8_3 112 559 IPR034197 -
Lja4g3063 723 Gene3D - 323 462 - -
Lja4g3063 723 Pfam Subtilase family 141 573 IPR000209 GO:0006508|GO:0008236
Lja4g3063 723 Gene3D Peptidase S8/S53 domain 142 275 IPR036852 GO:0004252|GO:0006508
Lja4g3063 723 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
Lja4g3063 723 CDD PA_subtilisin_like 329 454 - -
Lja4g3063 723 ProSiteProfiles Serine proteases, subtilase domain profile. 122 581 - -
Lja4g3063 723 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 721 IPR045051 -
Lja4g3063 723 Pfam Fibronectin type-III domain 625 718 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3063 Lja-Chr4 58033761 58036024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3063 7 721 Subtilisin-like Serine Gene Family AT5G67360 55.979 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3063 - - gmx:100801866 879.011