Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3030 ATGAAAACAGTTCGGCATGTGACCGCTGACAAAATAACAGCTGATATGTGGGAATGGAGAAAATATGGACAAAAACCCATCAAAGGTTCTACGTATCCAAGGAGTTATTACAAATGCAACAACATGAAAAAATGTGACGCGAAAAAGCAAGTAGAACGAAGCAGAACGGACCTGAGCATGTTTATTGTGACATACATCGGAGATCACGATCATGAGAAACCGCTTCTTCGGAACATGCTTTGCAAAACCTCAAGGGTCAAGCCATTAACGACCCATTTACCTAACACCTCGCAAACCAAGGCACCCACCAACACTGGGAGCGTTAGTTTATCGGGTATTCCTCCCATGCTGGTGTCAGATCTGCTAGAGAATGGTGACAAAACAGTTAACCATAGCGAACTTGAAGGCCCTGACATGGAAATAGAACCTAAATCAGTCTCCGATGATGATGATGACATTCTAATACCCATATCAGATCTGCTGGAGAATGGTGACAAAATGGTTATCCATGGAGAAGCCGAAGGCCCTAACTCGGAAATAGAAGCTAAATCAGTCTCCGACGATGGTGATGACACTCTAGTACCCATATCATATCTGCTGGAGGACGATGACAAAATGGTTAACCATGGAGAACCCGAAGGCCCTGACCTGGAAATAGGACCTAAATCACTCTCCGATGAGGATGATGACATACTAATACCTAACTTTGCTGCCATGTCAAACATCTTCGAAATGGGATATCAATCTTTTGATGGTGGAGTCACTCACATGGGCGAGTCAGATCCTAATTGCACGCGGTGGTTGATCTAA 810 0.4407 MKTVRHVTADKITADMWEWRKYGQKPIKGSTYPRSYYKCNNMKKCDAKKQVERSRTDLSMFIVTYIGDHDHEKPLLRNMLCKTSRVKPLTTHLPNTSQTKAPTNTGSVSLSGIPPMLVSDLLENGDKTVNHSELEGPDMEIEPKSVSDDDDDILIPISDLLENGDKMVIHGEAEGPNSEIEAKSVSDDGDDTLVPISYLLEDDDKMVNHGEPEGPDLEIGPKSLSDEDDDILIPNFAAMSNIFEMGYQSFDGGVTHMGESDPNCTRWLI* 270
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3030 269 ProSiteProfiles WRKY domain profile. 8 74 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja4g3030 269 SMART WRKY_cls 13 73 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja4g3030 269 Pfam WRKY DNA -binding domain 15 72 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja4g3030 269 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 2 157 - -
Lja4g3030 269 SUPERFAMILY WRKY DNA-binding domain 8 74 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja4g3030 269 MobiDBLite consensus disorder prediction 205 228 - -
Lja4g3030 269 MobiDBLite consensus disorder prediction 130 149 - -
Lja4g3030 269 MobiDBLite consensus disorder prediction 90 110 - -
Lja4g3030 269 Gene3D WRKY domain 1 75 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja4g3030 269 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 2 157 IPR044810 GO:0003700
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja4g3030 Lja-Chr4 56892141 56893038 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3030 2 105 WRKY Transcription Factor Family AT4G01250 51.923 8.93e-33 120
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja4g3030 WRKY 7.9e-24 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3030 K13425 - gmx:100794708 157.918