Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja4g3030 | ATGAAAACAGTTCGGCATGTGACCGCTGACAAAATAACAGCTGATATGTGGGAATGGAGAAAATATGGACAAAAACCCATCAAAGGTTCTACGTATCCAAGGAGTTATTACAAATGCAACAACATGAAAAAATGTGACGCGAAAAAGCAAGTAGAACGAAGCAGAACGGACCTGAGCATGTTTATTGTGACATACATCGGAGATCACGATCATGAGAAACCGCTTCTTCGGAACATGCTTTGCAAAACCTCAAGGGTCAAGCCATTAACGACCCATTTACCTAACACCTCGCAAACCAAGGCACCCACCAACACTGGGAGCGTTAGTTTATCGGGTATTCCTCCCATGCTGGTGTCAGATCTGCTAGAGAATGGTGACAAAACAGTTAACCATAGCGAACTTGAAGGCCCTGACATGGAAATAGAACCTAAATCAGTCTCCGATGATGATGATGACATTCTAATACCCATATCAGATCTGCTGGAGAATGGTGACAAAATGGTTATCCATGGAGAAGCCGAAGGCCCTAACTCGGAAATAGAAGCTAAATCAGTCTCCGACGATGGTGATGACACTCTAGTACCCATATCATATCTGCTGGAGGACGATGACAAAATGGTTAACCATGGAGAACCCGAAGGCCCTGACCTGGAAATAGGACCTAAATCACTCTCCGATGAGGATGATGACATACTAATACCTAACTTTGCTGCCATGTCAAACATCTTCGAAATGGGATATCAATCTTTTGATGGTGGAGTCACTCACATGGGCGAGTCAGATCCTAATTGCACGCGGTGGTTGATCTAA | 810 | 0.4407 | MKTVRHVTADKITADMWEWRKYGQKPIKGSTYPRSYYKCNNMKKCDAKKQVERSRTDLSMFIVTYIGDHDHEKPLLRNMLCKTSRVKPLTTHLPNTSQTKAPTNTGSVSLSGIPPMLVSDLLENGDKTVNHSELEGPDMEIEPKSVSDDDDDILIPISDLLENGDKMVIHGEAEGPNSEIEAKSVSDDGDDTLVPISYLLEDDDKMVNHGEPEGPDLEIGPKSLSDEDDDILIPNFAAMSNIFEMGYQSFDGGVTHMGESDPNCTRWLI* | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja4g3030 | 269 | ProSiteProfiles | WRKY domain profile. | 8 | 74 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja4g3030 | 269 | SMART | WRKY_cls | 13 | 73 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja4g3030 | 269 | Pfam | WRKY DNA -binding domain | 15 | 72 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja4g3030 | 269 | PANTHER | WRKY TRANSCRIPTION FACTOR 27-RELATED | 2 | 157 | - | - | |
Lja4g3030 | 269 | SUPERFAMILY | WRKY DNA-binding domain | 8 | 74 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja4g3030 | 269 | MobiDBLite | consensus disorder prediction | 205 | 228 | - | - | |
Lja4g3030 | 269 | MobiDBLite | consensus disorder prediction | 130 | 149 | - | - | |
Lja4g3030 | 269 | MobiDBLite | consensus disorder prediction | 90 | 110 | - | - | |
Lja4g3030 | 269 | Gene3D | WRKY domain | 1 | 75 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja4g3030 | 269 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 2 | 157 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja4g3030 | Lja-Chr4 | 56892141 | 56893038 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja4g3030 | 2 | 105 | WRKY Transcription Factor Family | AT4G01250 | 51.923 | 8.93e-33 | 120 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lja4g3030 | WRKY | 7.9e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja4g3030 | K13425 | - | gmx:100794708 | 157.918 |