Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3023 ATGACCATCGATATGCTTCCATCCATGGCTCAAAATGGAAATGCTAGGACAAGCAGATCTTCATTTAGCTCTAGCAATGGGAATGAGGGTACCCCTGAGAACAACTGTGCTTCTGTTAGCAATGCTGATGGCTATGATAGTGATAACTCCAACTATGCATCACCCACGCCATCAACTCTGTCAATGGCGGTTCCCGCAGAACTAGCTGGAGCTGTACCCTTGATTGACAGATTCCAGGTGGATGTATTTTTAAAATTAATGCATAAACAAATTCAATCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTGTAGGTCCCCAAGCTCGAGAGAAATATACATTTGAGGACATGCTTTGTTTTCAAAAGGATCCGATACCAACTTCATTGCTTAAGATTGATGGTGATTCAGTAAGCCGGGCAACCAAGTTATTCCAGATAATTTTGAAATATATGGGAATTGATCCATCTGATCGTGTAGTGCCAGTAAGCTTAGATGAACGAGTTGAGCTCGTAGGTAAACTATACAAGCAAAGTTTGAAACGTTCAGAACTCCGAGATGAACTTTTTGTTCAGATATCAAAACAGACAAGAAATAACCCTGAGAGGCAATACTTGATCAAAGCATGGGAGCTTATGTATTTATGTTCGTCCTCCATGCCTCCTAGTAAAGATATTGGGGTTTATCTATCAGAATACATTCATAGCATAGCACATGGTGTGGCTACTGATCCCGAGATCCAAGCCCTTGCATTAAATACATTAAATGCTTTGAAGCGTTCTGTCAAGGCTGGTCCAAGACATATAATACCTGGGCGAGAGGAGATTGAAGCTCTGTTGAATGGGAGAAAGCTTACAACTATAGTGTTCTTCCTGGATGAAACTTTTGAAGAAATCACATATGACATGTCAACAACAGTTTCTGATGCTGTTGAGGAACTTGCAGGCCTCATTAAACTGTCAACGTACTCTAGCTTTAGTCTGTTTGAATGTCGTAAAGTTGTTACCGGCTCCAAATCATCTGATCCTGGGAATGAGGAGTATATTGGGTTAGATGATAACAAATATATTGGGGATCTCCTGGCGGAATTTAAAGCAGCAAAAGATCGAAGTAAGGGAGAAGTTTTGCACTGTAAACTGATATTCAAGAAAAAGTTATTTCGCGAGTCAGATGAAGCTGTGACAGAACCAATGTTTGTGCAGTTGTCCTATGTACAATTGCAACACGATTATATTTTGGGTAATTATCCAATTGGAAGGGATGATGCTTCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATTTGTTAGCACACCTGAAACTGGCAGTAACTGGAATTCACTTTTAGAGCGCTTCCTTCCTAGACAAATTTCGATGACACGAGCTAAACGTGAATGGGAGTGTGATATTCTTTCTCGTTATCATTCAATGGTGCATATGACAAAAGATGATGCAAGACAACAATTTCTGCGTATATTAAGAGCGCTTCCTTATGGGAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTCCTGCCTGGACGAATAATATTGGGAATTAATAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCTAAAGAATATTTGCACTCAGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATACTGCAGTCTTTTTCAAAATGCGAGTGGCAAGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGCATAGCTCTTCAGACACATATAAATGATGTAATCATGCGCCGCTATTCAAAAGCACGGTCTGCCAGTGGAGGTGGTTCTTTGAATGGAGATGTTTCTAATAATTTTAAGCCTCCTAATTTAGAATTATATGAGAAGCGTATTCAAGATCTATCAAAACTTGCTGAAGAATCTCAAAGAAATGCTGATGAATTGCTTAAAGAATTGCGTGAGAAGCAAGGAAAAGAAGAGAAAATGCAAGACGAATTGGAGGGTTTAAAGAAATCCTTAAAAGCTGATAAGCAAAATCTTGAGGTAGTGGCAAGTGACTGTGACAGGCTTAGATCATTATGCAATGAAAAAGATGAGGCACTACAGGCTGCAATTCAAGAGAAAAGGAATATGGAAGCAAGGATGGCCAAGTTGAGTAATGTGGTCATAGAGAACTCTGCCAAAGAGGGTCTTATTGGAGAAAATAACCGAGTGCTACAAAAGCTTAAATATGAGCTAAAACATTGTAAAGATGAGCTGCATTCTGCTGAAGAAACTATCAAAGCCTTGACAAGTGAAAAAATGGTTTTGGAACAGAAGCTATCTGCACTTGAGAAGAGAAATGCTGAAGAGAGTAGTTCTCTTCAACGGAAACTGGAGCAAGAACGCAGAGCTGTGAAGTCTGAAGTGTTTGATCTACAAAGAAAGCTAGAAGGGTGCAGAGAAGAATTAATGTCTGCTAAGTCTACTATTTCAGTCAAGGACTCTGAGTTGGCTGCATTGCAGAATAATTTAAAGGAACTAGACGAATTGCGAGAAATGAAAGAGGACATTGATAGGAAGAATGAACAGACAGCTGCCATATTGAAGATGCAAGGGGCTCAACTAGCTGAAATGGAAGTTCTTTATAAGGAAGAACAAGTTTTAAGGAAGCGTTACTTTAATATAATAGAAGACATGAAAGGCAAGATCAGAGTTTACTGTCGACTAAGACCTCTTAGTGGAAAAGAGATTGCTGAGAAAGAAAGAGAAGCTATTATTGCGTTCGATGAGTTCACTGTTGAATATCAATGGAGGGATGATAAGCCAAAGCAGTACATATATGATCGTGTTTTTGGTGGGGATGCAACTCAAGAAAGTGTATTTGAGGATACGAGGTATTTGGTGCAATCTGCTATAGACGGTTATAATGTCTGTATATTCGCTTACGGTCAAACTGGCTCTGGAAAGACATATACAATCTATGGAAGTGAAGACAACACTGGACTTACCCCTCGCGCAATTGCAGAACTTTTTAGAATTTTAAGGAGAGATAATAACAAGTATTCCTTTTCCTTAAAGGCATACATGGTGGAATTATATCAAGATACCCTTATAGATCTTTTGTTGCCCAAGAATGCAAAGCATTTAAAATTGGATATCAAGAAGGATTCGACGGGAATGGTTGTTGTGGAAAACGTAACAGTTATGCCGGTTTCTACAATTGAAGAGTTGAATGATATAATAAGAAGGGGATCTGAACGGCGGCATATATCGGGGACCCAAATGAATGAAGAAAGTTCAAGATCTCATCTTATTCTATCAATTGTAATTGAAAGTACCAACCTTCAAAGCCAGACAGTTGCAAGGGGAAAGTTGAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTGAAAAAGTCAGGTTCCAAAGGGAGTCAACTGAAGGAAGCACAAAGCATCAACAAATCATTATCAGCACTTGGAGATGTTATAAGTGCTTTGTCTTCTGGTGGTCAACACATACCTTACAGGAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTGAATGTTTCTCCAGTAGAATCAAGCTTGGATGAGACACATAACTCTCTTATGTATGCATCACGAGTGAGATCAATTATAAATGACCCTAGCAAAAATGTTGCTTCAAAAGAGATAGCGCGACTGAAGAAGTTGGTTTCTTATTGGAAGCAGCAAGCAGGTAGAGGACTTGAGAATGAAGATTTAGAAGAAATACAAGATGAACGATCATCTGAAGAGAGGACAGAGAGTCGTGGTAGCTCTAGGTAA 3822 0.3917 MTIDMLPSMAQNGNARTSRSSFSSSNGNEGTPENNCASVSNADGYDSDNSNYASPTPSTLSMAVPAELAGAVPLIDRFQVDVFLKLMHKQIQSAGKRGFFSKRSVGPQAREKYTFEDMLCFQKDPIPTSLLKIDGDSVSRATKLFQIILKYMGIDPSDRVVPVSLDERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCSSSMPPSKDIGVYLSEYIHSIAHGVATDPEIQALALNTLNALKRSVKAGPRHIIPGREEIEALLNGRKLTTIVFFLDETFEEITYDMSTTVSDAVEELAGLIKLSTYSSFSLFECRKVVTGSKSSDPGNEEYIGLDDNKYIGDLLAEFKAAKDRSKGEVLHCKLIFKKKLFRESDEAVTEPMFVQLSYVQLQHDYILGNYPIGRDDASQLSALQILAEIGFVSTPETGSNWNSLLERFLPRQISMTRAKREWECDILSRYHSMVHMTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVASVLHIFQFETKQGEEICIALQTHINDVIMRRYSKARSASGGGSLNGDVSNNFKPPNLELYEKRIQDLSKLAEESQRNADELLKELREKQGKEEKMQDELEGLKKSLKADKQNLEVVASDCDRLRSLCNEKDEALQAAIQEKRNMEARMAKLSNVVIENSAKEGLIGENNRVLQKLKYELKHCKDELHSAEETIKALTSEKMVLEQKLSALEKRNAEESSSLQRKLEQERRAVKSEVFDLQRKLEGCREELMSAKSTISVKDSELAALQNNLKELDELREMKEDIDRKNEQTAAILKMQGAQLAEMEVLYKEEQVLRKRYFNIIEDMKGKIRVYCRLRPLSGKEIAEKEREAIIAFDEFTVEYQWRDDKPKQYIYDRVFGGDATQESVFEDTRYLVQSAIDGYNVCIFAYGQTGSGKTYTIYGSEDNTGLTPRAIAELFRILRRDNNKYSFSLKAYMVELYQDTLIDLLLPKNAKHLKLDIKKDSTGMVVVENVTVMPVSTIEELNDIIRRGSERRHISGTQMNEESSRSHLILSIVIESTNLQSQTVARGKLSFVDLAGSERVKKSGSKGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIINDPSKNVASKEIARLKKLVSYWKQQAGRGLENEDLEEIQDERSSEERTESRGSSR* 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3023 1273 Pfam Kinesin motor domain 902 1217 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3023 1273 MobiDBLite consensus disorder prediction 1 57 - -
Lja4g3023 1273 PANTHER KINESIN-RELATED 617 1267 IPR027640 GO:0003777|GO:0007018
Lja4g3023 1273 Coils Coil 824 861 - -
Lja4g3023 1273 Pfam FERM central domain 391 505 IPR019748 -
Lja4g3023 1273 SMART MyTH4_1 121 280 IPR000857 GO:0005856
Lja4g3023 1273 ProSitePatterns Kinesin motor domain signature. 1117 1128 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja4g3023 1273 Gene3D - 503 611 IPR011993 -
Lja4g3023 1273 SUPERFAMILY Second domain of FERM 383 500 IPR035963 -
Lja4g3023 1273 Gene3D Kinesin motor domain 839 1218 IPR036961 -
Lja4g3023 1273 CDD FERM_B-lobe 400 498 IPR019748 -
Lja4g3023 1273 Coils Coil 694 721 - -
Lja4g3023 1273 PRINTS Kinesin heavy chain signature 1087 1104 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3023 1273 PRINTS Kinesin heavy chain signature 1167 1188 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3023 1273 PRINTS Kinesin heavy chain signature 1118 1136 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3023 1273 PRINTS Kinesin heavy chain signature 968 989 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3023 1273 Gene3D - 284 388 - -
Lja4g3023 1273 CDD FERM_C_KCBP 502 610 - -
Lja4g3023 1273 ProSiteProfiles FERM domain profile. 285 599 IPR000299 GO:0005856
Lja4g3023 1273 MobiDBLite consensus disorder prediction 1244 1273 - -
Lja4g3023 1273 Gene3D - 1220 1268 - -
Lja4g3023 1273 Gene3D MyTH4 domain 100 282 IPR038185 -
Lja4g3023 1273 SMART B41_5 281 505 IPR019749 -
Lja4g3023 1273 CDD KISc_C_terminal 894 1219 - -
Lja4g3023 1273 SUPERFAMILY PH domain-like 505 592 - -
Lja4g3023 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 896 1243 IPR027417 -
Lja4g3023 1273 SMART kinesin_4 894 1225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3023 1273 Coils Coil 624 683 - -
Lja4g3023 1273 ProSiteProfiles Kinesin motor domain profile. 896 1217 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g3023 1273 SUPERFAMILY Prismane protein-like 839 900 IPR011254 GO:0003824|GO:0016491
Lja4g3023 1273 ProSiteProfiles MyTH4 domain profile. 121 280 IPR000857 GO:0005856
Lja4g3023 1273 Coils Coil 739 809 - -
Lja4g3023 1273 Pfam MyTH4 domain 174 278 IPR000857 GO:0005856
Lja4g3023 1273 Gene3D - 397 498 IPR014352 -
Lja4g3023 1273 MobiDBLite consensus disorder prediction 1247 1273 - -
Lja4g3023 1273 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 617 1267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3023 Lja-Chr4 56582348 56597915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3023 30 1268 Calmodulin-binding Proteins AT5G65930 71.040 0.0 1812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3023 - - gmx:100807481 2068.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3023 4 56582348 56597915 Lja4g3023 4 56582348 56597915 ECH
Lja4g3023 4 56582348 56597915 Lja4g3023 4 56582348 56597915 PCT