Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3020 ATGGTCTTTGGCAAAGCCTCAATCGGCAAGAACAACCTGCGAATCTCCTCGTCCCTTCAGGATCTCGCCTCGTACCGCCACCTCGATCCGGAAGCCACCGACGCTACCACCGCCACCGCCGCTGCCGTCGATTTGAAGAAACCCCCTTTGCAGAGGGAGAGCCTCGTGTCCAGTTTCTCCAAGACAAAACCAGTTCAACCCGGAAACCCGGTTCGCAGGAAATGGGCCAGACCCATCACCCTCGCTCTGTGTCTCTTGCTGTTCGCGTTTCTGATCTACGCGATGTTAGCACTGGTTTTTTCCCACCAAGGATCAGGTAGGTACTATGTTGTTCTTGATTGTGGTAGCACTGGTACTCGGGTTTATGTGTACAAGGTTGAGGTTGAACATAAGGAGGATAGTTCTCTTCTTCCGATAACTGTTACTTCATTGAGAAGTGGTTTGAATAAGAAGCGTCGTGGTTCACAAAGTGGGCGTGCCTATGATCGCATGGAAACTGAACCGGGTCTGGACAAGTTGGTGCACAATGTTTCTGGTTTGAAAGCTGCATTGAAACCGCTTCTCAAGTGGGCACAGAAGCAGATACCTGAGGATTCTCATAAGAGCACTTCATTGTTTCTGTATGCCACTGCTGGTGTTAGGAGGCTTCCTGTTGATGATTCTAAATGGGTGTTGGATCATGCTTGGTCAGTGCTGAAGGGTTCTCCTTTTGTGTCTAGGAAGGATTGGGTGAAGACCATTACTGGGACTGAAGAAGCTTACTTTGGATGGATTGCGCTTAATTATCATAGTGGTATATTGGGGGTTAAGCCGAGGAGAGAAACTTATGGCGCGCTTGATTTGGGGGGGTCGTCGTTGCAGGTCACGTTTGAGAGTGATCAGCAGCTGAATAGTGAGACTAGTTTGTATGTTAGGATTGGATCAGTGAATCACCATCTCACTGCGTATTCTCTTGCTGGGTATGGCCTCAATGAGGCTTTTGATAAATCAGTGGGGTATCTTTATAAGAAGGAGGGTGGTGGTACAAAAAAAATGGAAGTTAAACACCCTTGCTTGCAATCTGGGTATAAGAATCGATATACATGCTCTCGTTGTTCTTCTGGTGAGAAAGAAGGTGAGAGTCCTAGAGTTAATAGTGGCAATGTGTTGGGTGGGAAAGGGCAATCAAAGACTCCGGTGACGCTTGTTGGTGCTCCTAATTGGCAAGAATGCAGTGCACTGGCAAAGGTTGCTGTTAATTTGTCTGAATGGTCTGATTTGAGTCCAGGACTTGATTGTGAAGTGCATCCTTGTGCGCTAAGAGAGAATCTTCCTCGACCGTTAGGCCACTTTTATGTGATTTCAGGGTTTTTCGTTGTGTATAGGTTTTTCAATCTAACTTCTGGAGCCACACTTGATGATGTGTTGGAAAAGGGTAGGGAGTTTTGTGAAAAAAATTGGGAAGTTGCAAAGAAGAGTGTTGCTCCTCAGCCTTTTATTGAGCAATACTGCTTCAGGGCACCTTATGTTACCTCACTTCTCAGAGAGGGTTTGCACATTACTGATGACCATATAACTGTTGGCTCTGGAAGTATCACTTGGACACTTGGGGTAGCCTTGTTGGAAGCTGGGAAGGCATATTCTACTAGATTTGGGCTTGGTGGTTTTGACTTGCTTCAGATGAAGTTGAATCCTGTGATTGTTATTGCCATTTTGCTTCTTTCTTCAATTCTTCTGCTTTGTGCTTTATCATGTGTTGTCAAGTGGGTGCCAAGATTTTTCCGGAGGCAGTATCTTCCCCTTTTCAGGCATAACAGTGCGTCCACTGCATCAGTTCTTAATATTCCTTCTCCTTTCCGGTTCCAGCGGTGGAGTCCAATCATTTCTGGAGAGGGAAGAATAAAGACACCACTCAGCCCTACAATTGCAGGTTCACAAGATAGACCATTTAGTCTGGGGCATGGTCTCGGTGACAATAGTGGCGGCATCCAGCTGATGGAATCTTCCTTTTACCCATCAGCTAGTAGTGTCTCGCATAGTTATTCATCAAGTAATTTAGGGCAGATGCAGTTGGAAAGCAGTAACATAGGGACCTTCTGGTCACCCCACAGAAGTCAGATGCGTCTGCAGAGTCGGAGATCACAATCTCGCGAAGACCTGAATTCCTCACTGTCAGAGGCACACATGGGGAAGGTTTAG 2178 0.4651 MVFGKASIGKNNLRISSSLQDLASYRHLDPEATDATTATAAAVDLKKPPLQRESLVSSFSKTKPVQPGNPVRRKWARPITLALCLLLFAFLIYAMLALVFSHQGSGRYYVVLDCGSTGTRVYVYKVEVEHKEDSSLLPITVTSLRSGLNKKRRGSQSGRAYDRMETEPGLDKLVHNVSGLKAALKPLLKWAQKQIPEDSHKSTSLFLYATAGVRRLPVDDSKWVLDHAWSVLKGSPFVSRKDWVKTITGTEEAYFGWIALNYHSGILGVKPRRETYGALDLGGSSLQVTFESDQQLNSETSLYVRIGSVNHHLTAYSLAGYGLNEAFDKSVGYLYKKEGGGTKKMEVKHPCLQSGYKNRYTCSRCSSGEKEGESPRVNSGNVLGGKGQSKTPVTLVGAPNWQECSALAKVAVNLSEWSDLSPGLDCEVHPCALRENLPRPLGHFYVISGFFVVYRFFNLTSGATLDDVLEKGREFCEKNWEVAKKSVAPQPFIEQYCFRAPYVTSLLREGLHITDDHITVGSGSITWTLGVALLEAGKAYSTRFGLGGFDLLQMKLNPVIVIAILLLSSILLLCALSCVVKWVPRFFRRQYLPLFRHNSASTASVLNIPSPFRFQRWSPIISGEGRIKTPLSPTIAGSQDRPFSLGHGLGDNSGGIQLMESSFYPSASSVSHSYSSSNLGQMQLESSNIGTFWSPHRSQMRLQSRRSQSREDLNSSLSEAHMGKV* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3020 725 MobiDBLite consensus disorder prediction 696 725 - -
Lja4g3020 725 Pfam GDA1/CD39 (nucleoside phosphatase) family 105 534 IPR000407 GO:0016787
Lja4g3020 725 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 47 697 IPR000407 GO:0016787
Lja4g3020 725 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 47 697 - -
Lja4g3020 725 Gene3D - 100 249 - -
Lja4g3020 725 Gene3D Exopolyphosphatase. Domain 2 250 522 - -
Lja4g3020 725 MobiDBLite consensus disorder prediction 366 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3020 Lja-Chr4 56523831 56529071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3020 10 725 Nodulin-like Gene Family AT4G19180 58.663 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3020 - - lja:Lj0g3v0174799.1 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3020 4 56523831 56529071 Lja4g3020 4 56523831 56529071 PCT