Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3015 ATGGATATCATCACTCTCTTTTCCTTGTTTGTTGCTTCGTTTCTCTTCATTGTTATGTTCAAATCACTCCTCAAGCCCTTCTTCTTCCCTTCCAAAAAAGGATTAAGACTCCCTCCTGGTTCCATGGGTTGGCCTTATATTGGAGAGACCTTTCAAATGTATTCTCAAGACCCTAGTGTCTTCTTTACCTCAAAAATCAAGAGGTATGGGTCTATATTCAAGTCCCACATTCTGGGTTGTCCTTGTGTGATGATTTCAAGCCCAGATGCTGCAAAGTTTGTGCTGAACAAAGCTCAACTCTTCAAACCAACATTTCCTGCTAGCAAAGAGAGGATGTTAGGAAAGCAAGCAATTTTCTTTCACCAAGGAGCATACCATGCAAACCTGAGGAGGCTTGTCCTTCGCACCGTCATGCCTGAGGCTATCAAGAACATCGTCTCGGACATTGAATCCATTGCCCAAAGTAGCCTCAAATCCTGGGAAGGAAAGTCAATCACCACTTTCCTTGAAATGAAAACATATACCTTCAATAATGCCTTGCTTTCAATTTTTGGAAAAGATGAAACTCAGTACATAGAGGATCTGAAACGATGCTACTACACCCTTGAGAAAGGGTACAATTCAATGCCCATTAATCTTCCAGGCACACTTTTCCATAAGGCAATGAAGGCGAGGAAAGAGCTCGCGCAGATTGTGGCAGATATTATTGCCACAAGGAGGAGCAAGAACCAAGATTACAATGACTTGTTGGGATCTTTCATGGAAGAGAAATCAGGCCTCACCGATGACCAAATCGTAGATAACATCATTGGTGTCATTTTTGCTGCTCGTGACACCACTGCCAGCGCTCTTACATGGATCGTCAAGTACCTTGATGAGAATCCCAATGTTTTAGAAGCTGTCATCGAAGAGCAAGAGTCTATATTGAAAGGCAAGGAAGAAAGAGGTGAAGATATTGGTTTGAATTGGGGAGACACAAAAAACATGCCATTGACTTCAAGGGTGATACAGGAGACTCTAAGAGTTGCCTCAATTTTGTCTTTCACATTCAGAGAAGCAATAGAGAATGTTGAATATGAAGGGTATCTCATACCAAAAGGGTGGAAAGTATTACCTCTTTTCAGAAACATACATCACAGTCTAGAAAATTATACAGATCCTGAGAAATTTGATCCTTCAAGATTTGAGGTTGCTCCAAAACCCAACACTTTTATGCCATTTGGCACTGGGATCCATGCATGTCCAGGCAATGAGTTGGCAAAGTTAGAAATTTTGGTGCTTATTCATCATCTGACCACAAAGTACAGGTGGTCAGTAATAGGTCCAAAAAGTGGGATTCAATATGGTCCTTTTGCTCTTCCCCAAAGTGGCTTGCCAATCACATTGTACCGCAAATCAATATCGCCTCAACAAAAAGACTAA 1422 0.4149 MDIITLFSLFVASFLFIVMFKSLLKPFFFPSKKGLRLPPGSMGWPYIGETFQMYSQDPSVFFTSKIKRYGSIFKSHILGCPCVMISSPDAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGAYHANLRRLVLRTVMPEAIKNIVSDIESIAQSSLKSWEGKSITTFLEMKTYTFNNALLSIFGKDETQYIEDLKRCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQIVADIIATRRSKNQDYNDLLGSFMEEKSGLTDDQIVDNIIGVIFAARDTTASALTWIVKYLDENPNVLEAVIEEQESILKGKEERGEDIGLNWGDTKNMPLTSRVIQETLRVASILSFTFREAIENVEYEGYLIPKGWKVLPLFRNIHHSLENYTDPEKFDPSRFEVAPKPNTFMPFGTGIHACPGNELAKLEILVLIHHLTTKYRWSVIGPKSGIQYGPFALPQSGLPITLYRKSISPQQKD* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3015 473 Pfam Cytochrome P450 38 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 PANTHER CYTOCHROME P450 26 12 463 - -
Lja4g3015 473 Gene3D Cytochrome P450 30 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 SUPERFAMILY Cytochrome P450 32 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3015 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Lja4g3015 473 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 12 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3015 Lja-Chr4 56227460 56231177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3015 1 461 Cytochrome P450 AT4G19230 71.490 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3015 K09843 - gmx:100170674 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3015 4 56227460 56231177 Lja4g3015 4 56227460 56231177 ECH
Lja4g3015 4 56227460 56231177 Lja4g3015 4 56227460 56231177 PCT