Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2964 ATGGATGGGGTCAGAACTGGTAGTAGTAGTAGTTGTAGTAGTGAAGCAGAGCAGCCTCAGTCCAGAGACTCGGCTTCTTCGTCGTCATCTTCATCGGGATGGCGTCCTCGGGGGCTCGTGTTTGCCGTGTTTGCTCCTTGTGTGCCGCAGCAGCAGCAGCAGCAGCGTCGTGAAGATGTTAGTGCTGGAAAGTCCCCAACATTGCGTGCGGTTGTGAGGAAACCATTGGTTACAAGATTGACCAAGGAAATAGTTGAAACATACCAACTATGCGATCCACAGTTTAAATATTCTGCAGATCTAAATCCAAAAAGATTTTTGACAAGCCCGTCTACTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCAGACCTTATTCTGACAGTGAATTTTGTCTTGGCCCATTTAGAGAAAAGTAAAAGATATATTGTCAAAGATGTCCTTGGCCAAGGGACATTTGGACAAGTGGCTAAATGCTGGGATCCAGAATCCAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAAGCACTGGTTGAAGTAACTATTTTAACAACGTTAAATAAGAAGTATGATCCTGAGGATAAGCATCACATTGTTCGTATATATGATTTTTTTGTGTATCAACGACATTTGTGCATATGCTTTGAACTGCTGGATACAAACTTGTATGAGCTTATCAAGTTGAACCATTTTAGGGGATTATCACTTGGCATTGTTCAGCTGTTCTCTAAGCAGATTTTATGTGGATTGGCTCTGTTAAAAGATGCTGGCATTATTCACTGTGATCTGAAGCCAGAAAACATTCTTTTATGCACGAGCGCTGTTAAGCCAGCAGAAATCAAGATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTACTCCTATATTCAGAGTCGATACTATAGATCTCCTGAGGTCCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGATGCATAGTGGCGGAATTGTTTCTTGGTTTACCATTGTTCCCTGGGGCTTCAGAATTTGATCTCTTGCGGCGGATGATTGAAATACTTGGAGGACAACCACCTGATTATCTGCTAAGGGATGCCAAAAACACAAGTAAGTTCTTTAAGTGTATCGGGAGTCTCCAGAGCATAGAGAACAGTGAGAGTGCCCATACTGCAAGTGTTTATCAAGCATTGACCGGGGAAGAATATGAAGCTAGAGATCTGAAGAAGCCAGCAATTGGAAAGGAGTATTTTAATCATATGAACCTTGAAGCCATTGTTACAAACTATCCCTACAGGAAAAATCTACCTAAGGAAGATATTGTCAAAGAAAGTCAAATACGATTGGCTCTTATTGACTTCTTGAAAGGGCTTGTTGAATTTGATCCTGCAAAACGCTGGTCACCCTTTCAGGCTTCAAAACATCCTTTTGTAACTGGGGAGCCTTTTACACACCCTTATAAGCCTGCCCCTGAGACTCCTCACGTCCCGGTAGTTCAAAATATCAAGGTTGATAATCATCCAGGAGGAGGGCACTGGTTTGCTGCTGGTCTATCACCCAACGTTCCAGGCAAAAGAGGTTCCCTCTATAGCAGTCCACATTTTCAGATGGGGCAACATCCATCTGCTAATAGTTATGGCAGCATAGGAAGCCATGGGAGCTATAATGAGAGTGCTGGGCTTGGAAGCAGCTATGGAAGTTACGGAGAGAGCAGTAACATGTTTGCTTACTATTCACCTATTGTTCCATCTGGTATGAACATGCACAGTCAGGGAAGTATGTCAATGCTTGGAAATAGTCCTGATGCTCGGAGAAGAGTTAAGTATCAACCGGGGAATGGGCTTGGTGTAAGTCCATCAGCTGGAAATTTTGCTCCTCTGCCCCTTGGTGCTAGCCCCTCACAGTTTACTCCGCCAAATTCCTATAGTCAGGTATCTGTTGGTTCTCCAGGACACTATGGACCTACATCTCCCGCGAGAGGAACTACTCATGGATCACCTTTGGGAAAGACAGCTGCAGCTAGCCAATTTAATAGAAGAAAGAATTGGGGACATTCCGGAAGTCCTCAAACTCAGGAAACAACATTTTCTTCGCATTGGCACGGTCAATATCCTGACAGCTCAAGCCATGCTGAGGGAACATCACAAGCTCTTGGCAGTTCACCATCTTATCTACAACCAAATACTAATCCTGGAAACTGGAAGCAGCGAGGAAGTGGAGGCATATCTGCTAATCAGAATATCACATGCTCTATGATGCCTAGTTCTAATCGAAACTCACAATTGACAGAATTGGTTTGTGATGATGTGGAGACAGGCATTTCACTGCCTGATCCTGGAGATTGGGATCCTAATTATAGTGATGAACTACTACTTCAAGAGGATGGTTCAGATGAAAGCTCCTTGACAACTGAGTTCGGCAGTATGAATCTCGGTTCCACTGAACCATGGTCTGGATTTGGAAGGTTCAATCCCGTCTCCAACTCTAGCACTCCAATATTCGTGCAAAGAAGAAATGGACCAGGTCAAACATTTTCTAATGTAGAGATGGGTAGTCCTCCAACACATGATCTTCACGCATCATATATACCCTCTATGTCAAAGCCTTTTCATGCCATGCCTCATATTTCACAAAATACTCCAAGCCGTCTTGGACACCAATCTGTTCAAAGGTTCACACATGGGAGACCCCCCCCAGGGGGTGACTGGAATCAAATTAAGCTTCAGGCTCCTCCTTCTGGTTTCAACAGTGTGGGGCCACGTTCTCCCAGGAATACCTCATTCACCAACAGTATGTCATGGGGGCGAAGAATGAACCCTCCAGTCTCAAACATACCACCTGCATCGCGCACAAGAAAAGATTATGCAAGGATAGACTAG 2901 0.4374 MDGVRTGSSSSCSSEAEQPQSRDSASSSSSSSGWRPRGLVFAVFAPCVPQQQQQQRREDVSAGKSPTLRAVVRKPLVTRLTKEIVETYQLCDPQFKYSADLNPKRFLTSPSTGVLNDGYDNVNSDLILTVNFVLAHLEKSKRYIVKDVLGQGTFGQVAKCWDPESNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDFFVYQRHLCICFELLDTNLYELIKLNHFRGLSLGIVQLFSKQILCGLALLKDAGIIHCDLKPENILLCTSAVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYLLRDAKNTSKFFKCIGSLQSIENSESAHTASVYQALTGEEYEARDLKKPAIGKEYFNHMNLEAIVTNYPYRKNLPKEDIVKESQIRLALIDFLKGLVEFDPAKRWSPFQASKHPFVTGEPFTHPYKPAPETPHVPVVQNIKVDNHPGGGHWFAAGLSPNVPGKRGSLYSSPHFQMGQHPSANSYGSIGSHGSYNESAGLGSSYGSYGESSNMFAYYSPIVPSGMNMHSQGSMSMLGNSPDARRRVKYQPGNGLGVSPSAGNFAPLPLGASPSQFTPPNSYSQVSVGSPGHYGPTSPARGTTHGSPLGKTAAASQFNRRKNWGHSGSPQTQETTFSSHWHGQYPDSSSHAEGTSQALGSSPSYLQPNTNPGNWKQRGSGGISANQNITCSMMPSSNRNSQLTELVCDDVETGISLPDPGDWDPNYSDELLLQEDGSDESSLTTEFGSMNLGSTEPWSGFGRFNPVSNSSTPIFVQRRNGPGQTFSNVEMGSPPTHDLHASYIPSMSKPFHAMPHISQNTPSRLGHQSVQRFTHGRPPPGGDWNQIKLQAPPSGFNSVGPRSPRNTSFTNSMSWGRRMNPPVSNIPPASRTRKDYARID* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2964 966 Gene3D Phosphorylase Kinase; domain 1 107 223 - -
Lja4g2964 966 SUPERFAMILY Protein kinase-like (PK-like) 139 507 IPR011009 -
Lja4g2964 966 MobiDBLite consensus disorder prediction 599 764 - -
Lja4g2964 966 Gene3D Transferase(Phosphotransferase) domain 1 224 486 - -
Lja4g2964 966 SMART serkin_6 143 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2964 966 MobiDBLite consensus disorder prediction 921 966 - -
Lja4g2964 966 PANTHER BNAC04G29850D PROTEIN 27 879 - -
Lja4g2964 966 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Lja4g2964 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Lja4g2964 966 PANTHER DUAL SPECIFICITY PROTEIN KINASE 27 879 - -
Lja4g2964 966 Pfam Protein kinase domain 144 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2964 966 MobiDBLite consensus disorder prediction 921 945 - -
Lja4g2964 966 MobiDBLite consensus disorder prediction 641 658 - -
Lja4g2964 966 CDD PKc_YAK1 143 485 - -
Lja4g2964 966 MobiDBLite consensus disorder prediction 666 764 - -
Lja4g2964 966 ProSiteProfiles Protein kinase domain profile. 143 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2964 966 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2964 Lja-Chr4 54221686 54245309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2964 139 372 MAP Kinase Gene Family AT3G18040 34.818 5.53e-32 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Lja4g2964 Pkinase 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2964 K18670 - gmx:100792777 1644.4