Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2924 ATGGAGGCCGAGGTGCAAAACATGCTTAATTCAAATCCTCAACTAGTTCCAGAGACTGATGTTTCAGCTCAAAATGGGGATCCGGGTGTTTCCTCATCTGATGCTAATGCTATCATGCCTGAGATGCCTGCTCCAAAAAAACCGACGAGGCAGTGGGCTGCTTGGACTCGTCAAGAGGAGGAAAGCTTCTTCACCGCATTACGACAAGTTGGGAAAAATTTTGAGAAAATCACTTCCCGTGTACGAAGTAAAAACAAGAATCAGGTCAGGTATTATTATTACCGGCTTGTGAGACGCATGAACAAACTTCTTGGTCCAGGATTATCTTTGGATGCCAAAAACTCCAAAGATACTAATACTGCAATGCTTCGCTGGTGGTCGTTATTAGAAAAGTATAGCTGCAAAGCCTCAAAGCTTCACCTAAAGCCCCGAAGGTTTAAAATATTTTTAGAAGCCTTGGAGCACCAACTTTTGAAGGACCGGAAGAAGAATGTAAGGAAGCGATCCTTGCAGGGGGGAAGCTGTCTTCCTCCTACTCCTAGCACAGTCTCAAACCAACATAGATCATTGGGAAATGATGACCTAGCAGATGATCTAGTTCTTGATGATAGTCAAAATAATATAAAAGTAGGACCTTCAAAACCATCACTGAAGCGCAATGTAAACATGGGTGTTAGCCGTAGTAACACTAAGGGAGATTCGAATACCATGAAACCTACAAGGCAACGAAAGAAATCTGGTATGAACACAACAGCTGCATATAAAAAATGGGAGAAGGCTGCAATTGCCGGTGTTTCTTTAGTTGCTGATGCTGCTGAGCATTTGGAGCGAGCTGCTACTGTTAAAGAGGTTGAACATGACCAGGAGAATCCAGGAGAAAAATGTGCTGATCCTGTTGAACATGTCCTGCCGTTACCCACATTTCCACAAAATCACTCTGTTGATAACAACATGCCAAACAGTATGAAACTTAAGCTCCAGTTATTCCCAATTGATGAACCTACCCGAAGAGCCTTGGAAATGGATAAGCATAATCCATACTTGGAGCTTACACTTAGTACACGAAAGAAGATATCATCGATTTTGGAACATCTAATCCGTAAATGGGGCAGTTCAAGCATAGCAATTGGGGAGTTAATGCTTTTTCCGTATGGCATTCAAAAGGAAAACTTGGTTAACTATCAGAGATGGACCCAGGAATGTACTCTTACTGCAGCAGATATACATGCAATGGTTGGAAGTCCGCCCATAGTCCGTTTAAGGTATGGTTGGTTCTCCAATACCGAGCTTGTGGCATTAAATATGCAAGTGCCTGTAGTATCCGACTGCATGCCTAAACAATCCAAAGTTGGTGTGGACAATACAAATGATCAGGTTATGAAATTGACATCACGTCCTACGCCATCAACTGATAATCATTCCATGGAGCTCTCTGAAGATTGTGGAACATCCTTGAACAGAAACTGTGCTCTTACCACTACTTCAACTGATCTGCCTAATGCTAGAGATGATAGTGTTTACCTGAATACAAGCTCTGAGGAACCTTGTGAACCTACGGACAATATATCATGGCATGGAAAAGATGTTGGGGATGGAACTGTGACTAGACAGTTAGAAGACATGGATGAGTTGAAATTAAGCAGTGGAGCAGGGCTGTCAGCTGGTGCGTGGGCTGACAGCCTTACCAACATTAGTGTGGGGGACCTGCTTTCAGGGGTATCCCAGGACTGCCATGATCCTCCTGTTGCTGAGAATTGTCACAGTGTTCAGCAAATTCCTTTTACTTGTGATTCTTTTGATGCTGCTATTGCTGCTCACATATCTAGACACCAAGATAAGATTGGACAGCCAGCTATGACATCTCATATGTCTTCCATCTGGGATGCTGAAGAAACATGTGATGCTTTCTCATTTAGAAAGGTTCATAGTTTTCATGAAAATGGTCCTTGTTTATCTCCCGTTAATTTAGAGTCTGAGAAAAAAGATCCTGGAAGCTATGAGAAGTTGGATAAGCTGTCACCTGAAAAAGAGAGGCTTGTGGATGATCAAACAGACTCTACGCCTATGGACAGTTCTGAGTCTGATGCAGATATCCAGGATCATTTAGCGAAGGAATTTAGCGGGATAGCAGATATGTATTGGCCTGATTCTTTGGGACCGTTGGATTTGGATGTACCAACAACTAAGTACCACAGTGAAGATCTACTTTTAAGTGATAGTCTCAGTGGACTGAACCGCTTGATAGCCAGCAGCCTGGATGCGTTCCAAAACTGCTCCTTTTTTGGGGTTGACAAGAAGGAAGCACCATCAACAGTTGAGGTTCAAGAAACTGCCACTCTTTCAGAGTTTAAAATTGGAAGTGGTACTTGA 2370 0.4283 MEAEVQNMLNSNPQLVPETDVSAQNGDPGVSSSDANAIMPEMPAPKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVRSKNKNQVRYYYYRLVRRMNKLLGPGLSLDAKNSKDTNTAMLRWWSLLEKYSCKASKLHLKPRRFKIFLEALEHQLLKDRKKNVRKRSLQGGSCLPPTPSTVSNQHRSLGNDDLADDLVLDDSQNNIKVGPSKPSLKRNVNMGVSRSNTKGDSNTMKPTRQRKKSGMNTTAAYKKWEKAAIAGVSLVADAAEHLERAATVKEVEHDQENPGEKCADPVEHVLPLPTFPQNHSVDNNMPNSMKLKLQLFPIDEPTRRALEMDKHNPYLELTLSTRKKISSILEHLIRKWGSSSIAIGELMLFPYGIQKENLVNYQRWTQECTLTAADIHAMVGSPPIVRLRYGWFSNTELVALNMQVPVVSDCMPKQSKVGVDNTNDQVMKLTSRPTPSTDNHSMELSEDCGTSLNRNCALTTTSTDLPNARDDSVYLNTSSEEPCEPTDNISWHGKDVGDGTVTRQLEDMDELKLSSGAGLSAGAWADSLTNISVGDLLSGVSQDCHDPPVAENCHSVQQIPFTCDSFDAAIAAHISRHQDKIGQPAMTSHMSSIWDAEETCDAFSFRKVHSFHENGPCLSPVNLESEKKDPGSYEKLDKLSPEKERLVDDQTDSTPMDSSESDADIQDHLAKEFSGIADMYWPDSLGPLDLDVPTTKYHSEDLLLSDSLSGLNRLIASSLDAFQNCSFFGVDKKEAPSTVEVQETATLSEFKIGSGT* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2924 789 MobiDBLite consensus disorder prediction 164 192 - -
Lja4g2924 789 PANTHER CRAMPED PROTEIN 37 754 - -
Lja4g2924 789 SMART sant 51 99 IPR001005 -
Lja4g2924 789 MobiDBLite consensus disorder prediction 660 684 - -
Lja4g2924 789 MobiDBLite consensus disorder prediction 205 250 - -
Lja4g2924 789 ProSiteProfiles SANT domain profile. 55 101 IPR017884 -
Lja4g2924 789 MobiDBLite consensus disorder prediction 206 249 - -
Lja4g2924 789 MobiDBLite consensus disorder prediction 1 46 - -
Lja4g2924 789 MobiDBLite consensus disorder prediction 174 190 - -
Lja4g2924 789 MobiDBLite consensus disorder prediction 1 32 - -
Lja4g2924 789 MobiDBLite consensus disorder prediction 651 697 - -
Lja4g2924 789 Gene3D - 7 104 - -
Lja4g2924 789 SUPERFAMILY Homeodomain-like 46 101 IPR009057 -
Lja4g2924 789 ProSiteProfiles Myb-like domain profile. 47 97 IPR001005 -
Lja4g2924 789 Pfam Myb-like DNA-binding domain 54 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2924 Lja-Chr4 53153645 53160255 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lja4g2924 Myb_DNA-binding 7.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2924 - - aprc:113857455 1220.68