Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2907 ATGTTTCTCAGTGAGACCAGGGAAGTCCCCTATCAAGCCCCTGAAAACCAAATCCTATCACAATCTATCTTTGGCTTTCTACAGAGTGACATCCCAAACCTCCATCTAAATACTCTCTTAAACCAGTTGCCGAACTCTTTCTTCCATTATGCAAGCCATCAATCTTCCCCTCCTTCTTCACACTTCCCCAACAGCAACTCAACTTCTGATGAAGCAGATGAGTACCAGCTCAACAAAATTGACATTGAAAGAAAACAGCGGCGAATGATATCGAACAGAGAATCAGCCCGCAGATCAAGGTTGAGGAAGCAGAAGCACTTAGATGAACTTTGGTCACAGGTGGTTAGACTCAGGACTGAGAACCACAACCTTATTGACAAACTGAACCATGTAACTGAGTCCCATGACAGGATTCTTCAAGAAAATGCACGCCTGAAGGAAGAAGCTTCTGATCTATGCTTGCTTCTTGCAGACCTCCAATTTGGCACTTCTTTTAGTAGTACCATGAGAGATTTTGATGAAGATTTGTGCAATATTCCACAACTCAGTGATGATGAGTCCTCAAAACAATCACTAGACATGCTGTTAAAATGA 594 0.4242 MFLSETREVPYQAPENQILSQSIFGFLQSDIPNLHLNTLLNQLPNSFFHYASHQSSPPSSHFPNSNSTSDEADEYQLNKIDIERKQRRMISNRESARRSRLRKQKHLDELWSQVVRLRTENHNLIDKLNHVTESHDRILQENARLKEEASDLCLLLADLQFGTSFSSTMRDFDEDLCNIPQLSDDESSKQSLDMLLK* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2907 197 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
Lja4g2907 197 PANTHER BZIP PROTEIN (ATBZIP48) 1 192 - -
Lja4g2907 197 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Lja4g2907 197 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Lja4g2907 197 MobiDBLite consensus disorder prediction 51 71 - -
Lja4g2907 197 Coils Coil 128 148 - -
Lja4g2907 197 Gene3D - 82 137 - -
Lja4g2907 197 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Lja4g2907 197 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 192 IPR044521 -
Lja4g2907 197 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Lja4g2907 197 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2907 Lja-Chr4 52614768 52615361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2907 25 179 bZIP Transcription Factor Family AT3G30530 51.875 1.90e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja4g2907 bZIP_1 5.5e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2907 - - gmx:778126 233.032