Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2891 ATGGATCTTGAACTCCCAAATTTATCTGCCAATGAATCTCAACAACCAAAATTCACTCTTCCTGTGGATTCAGAAAACAAGGCCACTGAATTCAGATTATTTTCTTTAGCTAAACCCCACATGCGTTCATTCCATCTATCTTGGTTCTCCTTCTTTGCATGCTTTGTTTCCAGTTTCGCCGCAGCACCCCTTGTTCCCATCATTCGTGACAACCTCAACCTCACAGCCACAGATGTTGGAAATGCTGGAGTTGCATCTGTCTCAGGTGCTGTCTTTGCCAGAATAGTCATGGGAACAGCCTGTGACTTGTTTGGACCGCGCCTCGCATCGGCCTCACTCATCTTCCTCACCGCGCCAGCAGTGTACTGCACTTCCATCATCTCCTCAGCTAACTCCTACCTCCTCGTCCGCTTCTTCACCGGCTTCTCCTTAGCTACCTTCGTCTCCACGCAGTTCTGGATGAGCTCCATGTTTTCAACCAATGTTGTTGCCTCAGCAAATGGACTAGCAGGTGGATGGGGAAACCTTGGAGGAGGAGCAACACAGCTCATCATGCCCCTTGTGTTTTCCCTCATCCAAGACTTTGGCGCTACCAAATTCACCGCGTGGCGAATCGCTTTCTTCATTCCTGCTTTTTTACAAATGCTGACAGCTTATTTCATTTTGGTATTTGGTCAGGACATGCCGGATGGGAACTACCATCGGTTGGAGAAGTCAGGGGATAAACCAAAAGATGAATTGTCAAAAGTTGTTTATCACGGAGTCACAAATTATAGAGCGTGGATTCTAGCATTGACTTATGGTTACTGCTTTGGTGTGGAACTTACCATTGACAACATCATTGCTGAGTACTTCTATGACAGGTTTAATCTGAAACTTCACACTGCCGGAATCATCGCTGCGAGTTTCGGCTTAGCTAACATATTTTCTAGACCTGGAGGGGGTTATGTATCAGATGTCATGGCAAGGAGGTTTGGAATGAGGGGTAGGCTATGGATCTTGTGGCTGACTCAAACCTTGGCTGGTGTGCTCTGTATAATCATGGGCTTGGTTGGATCTCTAAGTGTATCCATCATTGTTATGATCATATTCTCTGTCTTTGTCCAAGCTGCATGTGGAATGACCTTTGGAATTGTTCCCTTTGTCTCAAGAAGGTCATTAGGGGTCATATCTGGAATGACAGGAGGAGGAGGCAATGTGGGTGCAGTGGTGACTCAGTTAATATTCTTCAAAGGATCAAGGTTTTCTAAAGAAAGAGGAATAACTCTAATGGGTGCCATGATCATAATATGCACATTGCCAATATGCTTAATCTACTTTCCACAATGGGGTGGGATGTTTTTGGGCCCTTCATCTAAGAAGGTCACAGAAGAAGATTACTACATGTCTGAGTGGAACTCCAAGGAGCAGCAGAAAGGATCACATCATGCAAGCTTGAAATTTGCTGATAACAGCACAAGTGAAAGAGGCAGAAAACACAACGGTGCAACTAGACCTGCTGAGATCACACCCCCACATGTTTGA 1524 0.4534 MDLELPNLSANESQQPKFTLPVDSENKATEFRLFSLAKPHMRSFHLSWFSFFACFVSSFAAAPLVPIIRDNLNLTATDVGNAGVASVSGAVFARIVMGTACDLFGPRLASASLIFLTAPAVYCTSIISSANSYLLVRFFTGFSLATFVSTQFWMSSMFSTNVVASANGLAGGWGNLGGGATQLIMPLVFSLIQDFGATKFTAWRIAFFIPAFLQMLTAYFILVFGQDMPDGNYHRLEKSGDKPKDELSKVVYHGVTNYRAWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANIFSRPGGGYVSDVMARRFGMRGRLWILWLTQTLAGVLCIIMGLVGSLSVSIIVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSRFSKERGITLMGAMIIICTLPICLIYFPQWGGMFLGPSSKKVTEEDYYMSEWNSKEQQKGSHHASLKFADNSTSERGRKHNGATRPAEITPPHV* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2891 507 SUPERFAMILY MFS general substrate transporter 33 441 IPR036259 -
Lja4g2891 507 Gene3D MFS general substrate transporter like domains 36 233 IPR036259 -
Lja4g2891 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 444 IPR020846 GO:0022857
Lja4g2891 507 MobiDBLite consensus disorder prediction 466 507 - -
Lja4g2891 507 CDD MFS_NRT2_like 44 437 IPR044772 GO:0015112
Lja4g2891 507 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 493 IPR044772 GO:0015112
Lja4g2891 507 Gene3D MFS general substrate transporter like domains 248 444 IPR036259 -
Lja4g2891 507 Pfam Major Facilitator Superfamily 48 404 IPR011701 GO:0022857|GO:0055085
Lja4g2891 507 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 10 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2891 Lja-Chr4 51200844 51203157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2891 17 491 Inorganic Solute Cotransporters AT1G12940 74.316 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2891 K02575 - gmx:100787888 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2891 4 51200844 51203157 Lja4g2891 4 51200844 51203157 ECH