Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2861 ATGGCAGATAGAATTTACCCTACAACCCCAACCTTGCTTTGTTTGGAAAATATCGACATGTGCTTTGATGATTGGGAAGGCAATGCTGCTGATGGATCACCTTCGTGGGACAAAAAAAAACGTAAATTTAACAATCTATGTTTGATTAGTGACAACCATGGATCGAAACCTTTTATGGGTTTTCTCACTCATAGTGATGAATATGCTGGGTTTCTGATTGAGAGGGAGAAAGCACATTTGCCCCGGGATGATTACTTGATGAGGCTGCGTAGTGGGGACTTGGACTTGGGTGCTAGAATGGAGGCTCTTGAACTGATTTCAAAGGTTCATGCAAATCATGATTTGGGACCCTTTAGCCTTTGTCTCTCTGTGAACTACTTGGATCGGTTTCTATCAGTGCATGAATTACAGAGTGGTCCGGATTGGGCTGTGGGATATTTGGCTGTAGCATGTGCATCAATTGCTTCTAAAGTGGAAGGGAATAAATTTACGAAATCTAAAGATTTACTGGTTGGAGAACCAAATTTTGAATTTGATGGTAAAGCCCATCAAAGAATGGAACTTATGATGTTAAGCAAATTGAATTGGAAAATGCAAGCTTTAACGCCATGTTCCTTCTTAGACTACTTCCTCGAAAAAATGAGTCATGAGCAACAACTAACAGACTTGTCATTTGCGAGATCAGTAGAACTCGTCCTCAACATAACTAAATGTGTTGATTTCTTAGAATTCAAGCCTTCTGAAATTGCAGCAGCAGTGGCAATATCTGTTTCAAGAGAATCGCAACCAAAAGATATAGATGAGGCCTTAACTTGTATCTCCATGGTAGCAAAGGAGAGAGTCTTGAAGTGTCTTGATCTGATGAGAGATTTTTCTTTGATTAAAGTTTCTGATGATTTAGGCAACGACTTGGCATCATTCATACCTGAAAGCCCTGTTGGGGTACTGGATAGTGCATGCTTGAGCTCAAAAAGTGATGCATTAATAGTTGGATCATATACAGATTCTTGGTATTATAGTCCAAATCCTAAGAGGTTCAAATCATCTGGACCCTCTGATGGGACTTTCTAG 1071 0.3987 MADRIYPTTPTLLCLENIDMCFDDWEGNAADGSPSWDKKKRKFNNLCLISDNHGSKPFMGFLTHSDEYAGFLIEREKAHLPRDDYLMRLRSGDLDLGARMEALELISKVHANHDLGPFSLCLSVNYLDRFLSVHELQSGPDWAVGYLAVACASIASKVEGNKFTKSKDLLVGEPNFEFDGKAHQRMELMMLSKLNWKMQALTPCSFLDYFLEKMSHEQQLTDLSFARSVELVLNITKCVDFLEFKPSEIAAAVAISVSRESQPKDIDEALTCISMVAKERVLKCLDLMRDFSLIKVSDDLGNDLASFIPESPVGVLDSACLSSKSDALIVGSYTDSWYYSPNPKRFKSSGPSDGTF* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2861 356 PANTHER CYCLINS 59 349 IPR039361 -
Lja4g2861 356 SMART Cyclin_C_2 201 325 IPR004367 -
Lja4g2861 356 Pfam Cyclin, C-terminal domain 202 292 IPR004367 -
Lja4g2861 356 Gene3D - 82 199 - -
Lja4g2861 356 SUPERFAMILY Cyclin-like 62 198 IPR036915 -
Lja4g2861 356 Gene3D - 72 286 - -
Lja4g2861 356 SUPERFAMILY Cyclin-like 185 293 IPR036915 -
Lja4g2861 356 PANTHER CYCLIN-D4-1-LIKE 59 349 - -
Lja4g2861 356 Pfam Cyclin, N-terminal domain 71 198 IPR006671 -
Lja4g2861 356 CDD CYCLIN 99 160 IPR013763 -
Lja4g2861 356 SMART cyclin_7 104 192 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2861 Lja-Chr4 49929708 49931604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2861 55 269 Core Cell Cycle Gene Families AT5G65420 50.459 2.13e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2861 K18810 - gmx:100800570 364.77