Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2857 ATGGCGGACCAAAAGAACCGCTGGAGTTGGGACGTTGCCGGCTTCGAGCCATGGAAGTCATCGCCACCGCCGCCGCCGTCGTCATCGTCGCCGTCGCCTTCGGTTGAGCAAGACGATCGGAAACCTAATGTGCCGTTGGTGAGGAGGTACTCCATTTCAGCTACTTCCGTTCTTCCACAGCCCAAGCCCTCCACTGTCTCCAAGCTTGAGCGTTTGAGGACCAATGTCAAGCTTGCTAGAGAAGACTATTTGCAGTTAAGGCAAGAAGCGAGTGAACTTCAAGAATACTCAAATGCAAAACTTGATCGAGTTACACGGTATCTTGGTGTTCTAGCTGAGAAAACCCGCAAGCTAGATCAAGTTGCCCTGGAAACTGAAGCAAGAATATCGCCGTTAATCAATGAGAAAAGAAGATTGTTCAATGATTTATTGACATCTAAAGGAAACATACGAGTATCCTGCCGGACAAGGCCATTATTTGAAGATGAAGGTCCTTCAGTTGTTGAATTTCCAGATGACTATACCATTCGTGTAAATACTGGTGATGAATCCTTGTCAAACTCTAAGAAAGATTTCGAATTTGACCGGGTTTATGGACCTCATGTTGGACAAGCTGAGTTATTCACTGATGTTCAACCACTGGTGCAGTCAGCTTTGGACGGATATAATGTTTCCATATTTGCTTATGGACAAACCCATTCCGGAAAGACACACACTATGGAAGGATCAAGCTATGATCGGGGTTTATATGCTCGTTGTTTTGAGGAGTTATTTGATCTAGCCAACCTGGACACAACATCTACTTCACAATATAAATTCTGTGTTACAGTTTGTGAGCTCTATAATGAGCAGACAAGGGATCTACTTTTGGTATCAGGGAAAAACATGCCTAAACTATGTTTGGGATCACCTGAATGCTCCATAGAACTGGCGCAGGAAAAAGTTGATAACCCTCTGGACTTTTCTACAGTTTTAAAAGCTGCATTTCAGAGTCGGGGAAATGATTTATTAAAGATTAACGTATCTCATTTGATTGTCACGATACACATATTTTATAACAATTTGATCACTGGTGAAAACTCATATAGCAAACTTTCTCTGGTTGACTTGGCTGGAAGTGAAGGTTCAATAACAGAAGATGATAGTGGTGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTAACATCAAAGAAGGATATTGTTCCTTATGAAAATTCGGCATTAACGAAAGTACTTGCAGATTCACTTGGTGGGAGTTCAAAAACTCTGTTAATTGTGAATGTCTGTCCAAGTATTTCGAATTTATCTGAGACATTGTTGTCTCTAAATTTCTCTGCTAGAGCTCGAAACTCTGTATTAAGCCTTGGAAACCGAGATACAATTAAGAAGTGGAGAGATGTTGCTAATGATGCACGTAAGGAGTTGTATGAGAAGGAAAAAGAAATCCATGATTTAAAGCAAGAGGGTCTGGGACTCAAGCAAGCACTTAAAGATGCCAATGATCAGGGTGTTCTACTCTTCAATGAAGTACAAAAGGCTTGGAAAGTTTCTTCTGTACTGCAGACTGATTTGAAGTCGGAGCATATTTTGCTTTCTGATAAGTATAATATTGAGAAAGAACAAAATACTCAGCTTAGAAATCAAGTTGCTCAACTCTTACAGTTAGAGCAGGATCAAAAATTGCAGATACAGCAGCAAGATTCAACCATCAAAAGTTTGCAGGCTGAAATTAGAACTCTTGAAACTCAACTCAATGAAGCTCTTAGATCCAGCGAAAGTAGGTCAAAGTTTGTCTTAGAAAAAAGCTCTGAGACTCTATCTGATTCCAGACCAACTGGAGATGGCATGGAGACTTCTGCAGTAACCAAAAAATTAGAAGAAGAACTCAAGAAACGTGATGCCCTGATTGAGAGGCTGCATGAAGAAAATGAGAAATTATTTGATAGATTAACTGAGAAAAAATCTGTGGCTGGATCGCCCAAGCTTTCAAGTCCATCACCTCGTGAATCAGTTAATGCTCAGCCTCGAGATATGGGAAGGAATGGCACCAGCAATACAACATCTCAGTCCATGAATGTTCTCCCTTCACCTTTGGCCACTGATAAGAATGACGGCACAGTTGCATTAGTTAAATCTGACTCTGAAATAGTTAAGACTACCCCTGCTGGTGAATACCTTACTGCTGCCCTGAATGACTTTGATCCAGATCAGCATGAAGGGCATGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTGGCTGCTGTCATAAAAGCCGGTGCCTCTAGAGAACATGAGATACTTGCTGAAATTAGGGATGCTGTTTTCTCTTTTATTAAGAAAATGGAACCAAAGCGAGTTATGGACACCATGCTTGTTTCCCGTGTTAGAATTCTGTATATACGATCTTTACTTGCAAGATCCCCAGAGTTGCAATCGATTAAGGTCTTGCCAGTTGAGTGCTTTCTTGAGAAGACTAATACTGGTCGAAGTAGAAGTTCCAGCCGAGGGAATAGTCCTGGAAGGTCTCCTGTGCAATATGTTGATGAGCAGATCCAGGGCTTTAAAGTAAATTTAAAGCCAGAAAAGAAGTCTAAATTTTCGTCTGTTGTGTTGAAGATACGTGGGATTGATCAGGACATCTGGAGGCAGCAAGTAACTGGTGGAAAGCTTAGAGAAATTACTGAGGAAGCCAAAAGTTTTGCAATTGGGAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCAGCTGGTGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCAGAGAATTTTGATTTTCTCTCTGTTTCTGGAAATGATGCATCGGAGGGGTCAACTGGTCAGTTGGAACTTCTTTCAACTGCAATTATGGATGGTTGGATGGCTGGACTAGGTGCTGCTCTACCTCCTCACACTGATGCTCTTGGCCAGCTATTATTTGAATATTCAAAACGTGTGTATACTTCTCAACTACAGCACTTGAAGGATATTGCTGGTACCTTGGCAACAGAAGAGGCTGAAGATGCAGCACAAGTAGCCAAGCTGCGGTCTGCTCTAGAATCTGTTGATCATAAAAGAAGAAAGATTCTGCAACAAATGAGAAGTGATGTAGCTTTATTGACATTGGAAAATGGTGGTTCACCAATTTTGAATCCTTCTACTGCAGCTGAAGATGCGCGATTAGCATCTCTTATTTCACTTGATAGCATATTAAAGCAAATCAAGGATATAACAAGACTTTCTTCTGTGAGCATCTTGAGCAGAAGTAAGAAAAGAGCGATGCTTGCTTCTCTCAATGAACTAAAAGATCAAATGCCGTCACTTCTTGAAATTGATCATCCATGTGCTCATAGCCACCTTGCAGATGCTTGCCACATGGTTGAGTCAATTCCTGAAGAAGATGACCACATTCAAGATCCATCTCATGGTCGCAAATCAACAGATCTGGGGTCTGGATCTGAAATTGATGTGGCACAGTGGAATGTACTCCAATTTAATACGGGTGCTAGCTCACCCTTTATAATAAAATGTGGAGCGAACTCAAGTTCAGAACTAGTCATTAAAGCTGATGCTCGAGTTCAGGAACCTAAAGGCGGTGAAATTGTGAGAGTTGCCCCTAGACCCTCCATTTTGGAAAACATGAGCTTGGAGGAAATGAAACAAGTATTTGCCGAGCTACCTGAGGCTCTAAGCTTGCTTGCCCTAGCAAGGACTGCAGATGGCACTCGGGCACGATATTCTAGGTTATATAGGACTTTGGCTACCAAGGTTCCATCCCTTAGAGACTTGGTCAGCGAGCTCGAAAAGGGGGGTGCTCTCAAGGATGTAAGAACATGA 3885 0.4206 MADQKNRWSWDVAGFEPWKSSPPPPPSSSSPSPSVEQDDRKPNVPLVRRYSISATSVLPQPKPSTVSKLERLRTNVKLAREDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTRKLDQVALETEARISPLINEKRRLFNDLLTSKGNIRVSCRTRPLFEDEGPSVVEFPDDYTIRVNTGDESLSNSKKDFEFDRVYGPHVGQAELFTDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLANLDTTSTSQYKFCVTVCELYNEQTRDLLLVSGKNMPKLCLGSPECSIELAQEKVDNPLDFSTVLKAAFQSRGNDLLKINVSHLIVTIHIFYNNLITGENSYSKLSLVDLAGSEGSITEDDSGERVTDLLHVMKSLSALGDVLSSLTSKKDIVPYENSALTKVLADSLGGSSKTLLIVNVCPSISNLSETLLSLNFSARARNSVLSLGNRDTIKKWRDVANDARKELYEKEKEIHDLKQEGLGLKQALKDANDQGVLLFNEVQKAWKVSSVLQTDLKSEHILLSDKYNIEKEQNTQLRNQVAQLLQLEQDQKLQIQQQDSTIKSLQAEIRTLETQLNEALRSSESRSKFVLEKSSETLSDSRPTGDGMETSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEKKSVAGSPKLSSPSPRESVNAQPRDMGRNGTSNTTSQSMNVLPSPLATDKNDGTVALVKSDSEIVKTTPAGEYLTAALNDFDPDQHEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIKKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKTNTGRSRSSSRGNSPGRSPVQYVDEQIQGFKVNLKPEKKSKFSSVVLKIRGIDQDIWRQQVTGGKLREITEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAENFDFLSVSGNDASEGSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKRVYTSQLQHLKDIAGTLATEEAEDAAQVAKLRSALESVDHKRRKILQQMRSDVALLTLENGGSPILNPSTAAEDARLASLISLDSILKQIKDITRLSSVSILSRSKKRAMLASLNELKDQMPSLLEIDHPCAHSHLADACHMVESIPEEDDHIQDPSHGRKSTDLGSGSEIDVAQWNVLQFNTGASSPFIIKCGANSSSELVIKADARVQEPKGGEIVRVAPRPSILENMSLEEMKQVFAELPEALSLLALARTADGTRARYSRLYRTLATKVPSLRDLVSELEKGGALKDVRT* 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2857 1294 PANTHER KINESIN-LIKE PROTEIN KIN-14A-RELATED 2 1270 IPR030109 GO:0008017|GO:0009904
Lja4g2857 1294 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1270 - -
Lja4g2857 1294 MobiDBLite consensus disorder prediction 669 711 - -
Lja4g2857 1294 MobiDBLite consensus disorder prediction 662 712 - -
Lja4g2857 1294 Coils Coil 634 668 - -
Lja4g2857 1294 Coils Coil 575 602 - -
Lja4g2857 1294 Gene3D Kinesin motor domain 94 463 IPR036961 -
Lja4g2857 1294 SMART kinesin_4 147 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2857 1294 MobiDBLite consensus disorder prediction 603 635 - -
Lja4g2857 1294 PRINTS Kinesin heavy chain signature 221 242 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2857 1294 PRINTS Kinesin heavy chain signature 413 434 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2857 1294 PRINTS Kinesin heavy chain signature 364 382 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2857 1294 Pfam Kinesin motor domain 155 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2857 1294 Coils Coil 547 570 - -
Lja4g2857 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 500 IPR027417 -
Lja4g2857 1294 ProSiteProfiles Kinesin motor domain profile. 149 463 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2857 1294 MobiDBLite consensus disorder prediction 1 44 - -
Lja4g2857 1294 Coils Coil 473 514 - -
Lja4g2857 1294 Coils Coil 69 96 - -
Lja4g2857 1294 ProSitePatterns Kinesin motor domain signature. 363 374 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2857 Lja-Chr4 49854076 49875553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2857 136 464 Calmodulin-binding Proteins AT5G65930 36.364 1.02e-48 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2857 - - gmx:100818895 2170.97