Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2847 ATGCCGCTACTTTCTGACTACGACCTCCTCTGCGGCGAGGAAGCCTCCGGGATCCTCACCGTAGAGTCACCGGAATGCTCCTCCGACTTCTTCGATTTCTCTCCGCCGTCACCGTCGCCGTCGTCCACGGAGGAGGAGTCGATCGCCGTTTTCATTGAGCACGAGCGCAACTTCGTTCCTGGATTCGACTATCTCTCAAGATTCCAATCTCGCTCCCTCGATCCTGACGCAAGAGAAGAATCTGTTACATGGATTCTCAAGGTACACGCTTACTATGGGTTTGGGCCATTGACGGCGTACCTTTCCGTCAATTATATGGATCGGTTTTTGGATTCTCGCCATTTGCCGCAAACAAATGGGTGGCCTATGCAACTTATATCTGTTGCATGTTTGTCCTTAGCAGCAAAGATGGAGGAACCCCTGGTTCCCTCTCTCTTGGACCTTCAGGTAGAAGGTGCCAAATACATATTTGAGCCGAGAACAATTCGTAGGATGGAGCTACTTGTATTGGATGCCTTGGATTGGAGGCTTAGATCAGTAACCCCTCTTAGCTTCCTCGGTTTCTTTGCCTTCAAGCTTGATTCTACTGGAAAGTTTACTGGATTTCTCATTTCACGGGCTACAGAAATCATCTTATCTAATATCCATGACGTTAGCTTTCTTGCTTACAGGTCATCATGTATTGCCGCCGCGGCCATACTCTCTGCATCTAATGAAATTCCTGAGTGGTCTTTTGTTAAACCTGAGCATGCTGAGTCATGGTGCCAGGGTCTAAGAAAAGAAAAAATTATAGTGTGCTACAAGTTGATACAAGAGCTTATTGTGATTAACCACAGCAGCGGGAGGACCCCTAAAGTGTTGCCACAGCTTCGAGTAACAACTCGGACCCGGAGGTGGTCATGTATCTCATCACTGTCTTCGTCTTCGTCTTCCTCTTCCTCTTCATCGTCTTTCTTATTGTCCAATAAAAGAAGGAAATCAAATAACTGTTTGTGCATAGATGATGATGACAGATGA 1017 0.468 MPLLSDYDLLCGEEASGILTVESPECSSDFFDFSPPSPSPSSTEEESIAVFIEHERNFVPGFDYLSRFQSRSLDPDAREESVTWILKVHAYYGFGPLTAYLSVNYMDRFLDSRHLPQTNGWPMQLISVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLDALDWRLRSVTPLSFLGFFAFKLDSTGKFTGFLISRATEIILSNIHDVSFLAYRSSCIAAAAILSASNEIPEWSFVKPEHAESWCQGLRKEKIIVCYKLIQELIVINHSSGRTPKVLPQLRVTTRTRRWSCISSLSSSSSSSSSSSSFLLSNKRRKSNNCLCIDDDDR* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2847 338 SMART Cyclin_C_2 180 308 IPR004367 -
Lja4g2847 338 SUPERFAMILY Cyclin-like 44 177 IPR036915 -
Lja4g2847 338 Gene3D - 51 241 - -
Lja4g2847 338 CDD CYCLIN 82 170 IPR013763 -
Lja4g2847 338 PANTHER CYCLINS 31 318 IPR039361 -
Lja4g2847 338 Pfam Cyclin, N-terminal domain 48 177 IPR006671 -
Lja4g2847 338 SUPERFAMILY Cyclin-like 162 275 IPR036915 -
Lja4g2847 338 Gene3D - 61 178 - -
Lja4g2847 338 ProSitePatterns Cyclins signature. 78 109 IPR006671 -
Lja4g2847 338 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 31 318 - -
Lja4g2847 338 SMART cyclin_7 83 171 IPR013763 -
Lja4g2847 338 Pfam Cyclin, C-terminal domain 180 290 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2847 Lja-Chr4 48988197 48991079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2847 5 296 Core Cell Cycle Gene Families AT1G70210 61.224 4.01e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2847 K18810 - gmx:100778578 465.692