Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2846 ATGTGTCGCACAGATCGTATTGTTTTCAAACTCTTTGGTAAAGAGCCGAGTGATTTTCCTCTTATACTTAGAGCACAGATTCTTGACTGGTTATCACACAGTCCTACTGATATTGAAAGCTACATACGACCTGGTTGTATTGTTTTGACAATTTATCTGCGCCAGGCTGAAGCTGTTTGGGAGGAAGCTACTGGATGTCTCAGATGA 207 0.4155 MCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEATGCLR* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2846 68 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 2 62 IPR044817 GO:0003677
Lja4g2846 68 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 2 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2846 Lja-Chr4 48854476 48855278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2846 3 62 SBP-box Gene Family AT3G60030 83.333 2.93e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2846 - - lja:Lj4g3v2820080.1 129.798