Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2844 ATGGGAGAGGAACAGGGCTCTATCAGCGAGGTCTTTGGCGACGGTGGGGTTGGTGCCGATGCCGGAGATGGATCGGTTCTATCAACATGGGGATGGAGAAGAATTTTGCAATGTGCTGTTTTTGGTTTCCCTTTCACGCTTCAGAATATGAAAGTTGGGGATGGTTTTAGTGACGGTGTTGTTCAGGGCCCTCTGATCAATGAAGCTGCTGTCAAAAAGGTTGAGTCCTTAATTCATGATGCTACATCAAAGGGGGCAAAAGTAATTATTGGCGGTAAACGACATAGTCTTGGACTCACTTTTTATGAACCAACATCGTTAGTGATGTCCACAATGATATGTGCATATCTAGAGAGGAAGCATTTGGACCTGTTGCGCCCCTTTTGA 387 0.4574 MGEEQGSISEVFGDGGVGADAGDGSVLSTWGWRRILQCAVFGFPFTLQNMKVGDGFSDGVVQGPLINEAAVKKVESLIHDATSKGAKVIIGGKRHSLGLTFYEPTSLVMSTMICAYLERKHLDLLRPF* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2844 128 Pfam Aldehyde dehydrogenase family 47 107 IPR015590 GO:0016491
Lja4g2844 128 SUPERFAMILY ALDH-like 47 108 IPR016161 GO:0016491
Lja4g2844 128 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 42 118 IPR016163 GO:0016620
Lja4g2844 128 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 46 114 - -
Lja4g2844 128 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 46 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2844 Lja-Chr4 48483367 48485248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2844 42 118 Aldehyde Dehydrogenase Gene Family AT1G79440 60.759 5.43e-26 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2844 K17761 - gmx:100808318 115.161