Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2828 ATGAAGGCAGATAGGATAGAAGAGAGCAGCGAGCGGTTGTTAGGTAGAAAAAGCAGCAACGGCAGCACTGGTGGGAGCAGTGAGTCTAGGTGGGTCGATGGCAGTGAAGTGGACTGGGATGATGTTCCTTCATGGTCTAAGAACCATGGAAATGATAGTAGACAAGGGTTTGGGTCAATCAGAAGGAGGCTTGTCAAGAAGCCCAATAGAGTTGACTCATTTGATGTGGAAGCCATGGAAATTGCTGGAACTCATGGTCAACACTCCCCGGATCTTTCACTTTGGCCCACACTTGCATTAGCATTTAAGACTCTTGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTATATGTTTTTGCTGATGTCTTCGGCAAGGTTCCGATTGGGTCAGATGTGGATGTCTTGGGGGCGTTATCATTAGTAATGTACACAATAGCCATTGTTCCACTAGCCAAATATGTTTTCATAGTCCTCAAAGCAAATGATAATGGAGAAGGAGGAACATTTGCACTATACTCGCTGATTTGCAGGTATGCAAATGTTAATCTTCTTCCAAATCGTCAACAAGCTGATGAATATATCTCTAGTTTCAAGCTCAAGCTGCCTACTCCAGAACTGGGAAGGGCCTTAAAAATAAAAGAGACTTTGGAAAGCTCATCAACTTTGAAAAATCTGTTGTTAGTGTTGGTTCTTCTGGGAACTTCCATGATTATCGGAGATGGTATTTTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGTTTGCAGGATCAAATAAAAGGATTTGGTACAGGTGAAGTGGTTTCTGTGTCTATTGTAGTTTTGGTGGCTTTGTTCAGCATACAGCGGTTTGGTACCAGTAAAGTGGGATTCATGTTTGCCCCTGTCCTTGCTATATGGTTCTTCTCTCTGGGTTCTATTGGAATATATAATATACTTAAATATGATATTACTGTTCTGAGAGCATTCAATCCTGCTTATATCTACTATTTCTTCAAGAAAAATGGCAAAAGTGCATGGTCAGCTCTCGGTGGTTGTGTTCTGTGCATTACAGGTGCAGAAGCAATGTTTGCAGATCTGGGACATTTTTCTGTACCAGCAATACAGATTGCCTTCACTTGTGTGGTATTTCCCTGCCTCCTCCTTGCTTATATGGGTCAAGGTGCTTTTTTGATGAAGAACCCCAGTGCTTATTCAAGTGTATTCTACAAATCTGTTCCAGAATCTCTCTTCTGGCCAATGTTTGTTATAGCCACACTTGCTGCTATGATTGCCAGCCAAGCAATGATATCTGCTACATTTTCATGCGTTAAGCAATCTATGGCTTTGGGATGCTTCCCCCGGCTCAAGATAATTCACACCTCAAGAAAATTCATGGGTCAAATATACATTCCTGTAATTAATTGGTTTTTGATGATCATGTGCATAGTTGTCGTTTCCATCTTCCAAAGTACTACTGATATTGCAAATGCATATGGTATTGCTGAAGTTGGTGTCATGATGGTTAGCACCACATTGGTTACACTAGTAATGCTGTTAATTTGGCAGACCAACTTGTTTTTGGCATTCTGTTTCCCTCTTCTGTTTGGCTCAGTGGAGCTCATCTACATGTCATCTGTCCTATCAAAAATCGCTGAGGGTGGCTGGCTTCCACTCGCCTTTGCTACGTTTTTCCTCTCCGTGATGTACACGTGGAACTACGGGAGTGTATTGAAGTACCGGAGCGAAGTTAGAGGGAAGGTTTCATTGGACTCAATGCTTGATCTTGGCTCCAATCTCGGAACAGTAAGAGTGCCAGGAATAGGATTGCTGTATAATGAGCTTGTCCAGGGAATTCCCTCCATATTTGTGCAGTTCCTGCTGGGCCTTCCAGCTCTCCACTCTATTATAGTTTTTGTCTGCATTAAATACATTCCGGTCCCCGTGGTTCCTCAAGAGGAAAGGTTTCTGTTTCGCAGAGTTTGCCCGAAAGATTACCATATGTTCCGGTGTGTTGCGAGGTACGGTTATAAAGATGTCAGGAAGGAAGATCACCATGCGTTTGAGCAACTTCTTATTGAAAGTCTCAAGAAATTCTTGAGAAGGGAGGCTCTAGAAACTGCCTTGGAGTTGGAGGCTAGCTTAACCGACGATTTGGACAGTGTCTCGGTGAATACAAGGGATTCTGATATTCCTGCTGGTAATGGGGCAGAGGAGCTTAGGATTCCACTGATGCAAGGTCAGAATTTGGAAGAAACGGGAGCTTCTACGTCTCAGGAAGCTGCATCAGCATTACCATCTAGTTACATGTCATCAGATGAAGATCCTAGTCTTGAGTATGAGCTTTCCGCACTTAGGGAAGCAATGGAATCAGGATTCACCTATTTGCTTGGACATGGCGATGTGAGGGCGAAGAAGAACTCTATTTTCTTTAAGAAATTGGTGATAAATTATTACTATGGATTTCTCAGAAAGAACTGCAGAGGAGGCACTGCAAACATGAGAGTACCTCACACCAATATCATTCAAGTGGGGATGACATATATGGTTTGA 2538 0.4287 MKADRIEESSERLLGRKSSNGSTGGSSESRWVDGSEVDWDDVPSWSKNHGNDSRQGFGSIRRRLVKKPNRVDSFDVEAMEIAGTHGQHSPDLSLWPTLALAFKTLGVVYGDMGTSPLYVFADVFGKVPIGSDVDVLGALSLVMYTIAIVPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEYISSFKLKLPTPELGRALKIKETLESSSTLKNLLLVLVLLGTSMIIGDGILTPAISVMSAISGLQDQIKGFGTGEVVSVSIVVLVALFSIQRFGTSKVGFMFAPVLAIWFFSLGSIGIYNILKYDITVLRAFNPAYIYYFFKKNGKSAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTCVVFPCLLLAYMGQGAFLMKNPSAYSSVFYKSVPESLFWPMFVIATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLMIMCIVVVSIFQSTTDIANAYGIAEVGVMMVSTTLVTLVMLLIWQTNLFLAFCFPLLFGSVELIYMSSVLSKIAEGGWLPLAFATFFLSVMYTWNYGSVLKYRSEVRGKVSLDSMLDLGSNLGTVRVPGIGLLYNELVQGIPSIFVQFLLGLPALHSIIVFVCIKYIPVPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLKKFLRREALETALELEASLTDDLDSVSVNTRDSDIPAGNGAEELRIPLMQGQNLEETGASTSQEAASALPSSYMSSDEDPSLEYELSALREAMESGFTYLLGHGDVRAKKNSIFFKKLVINYYYGFLRKNCRGGTANMRVPHTNIIQVGMTYMV* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2828 845 Pfam K+ potassium transporter 101 674 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g2828 845 PANTHER POTASSIUM TRANSPORTER 12-RELATED 12 845 - -
Lja4g2828 845 MobiDBLite consensus disorder prediction 33 47 - -
Lja4g2828 845 TIGRFAM kup: potassium uptake protein 100 845 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g2828 845 MobiDBLite consensus disorder prediction 15 30 - -
Lja4g2828 845 MobiDBLite consensus disorder prediction 1 54 - -
Lja4g2828 845 MobiDBLite consensus disorder prediction 747 769 - -
Lja4g2828 845 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 845 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2828 Lja-Chr4 47566539 47573243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2828 4 845 Inorganic Solute Cotransporters AT1G60160 73.491 0.0 1236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2828 K03549 - gmx:100814419 1428.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2828 4 47566539 47573243 Lja4g2828 4 47566539 47573243 ECH