Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2826 ATGGCTTCTGCACTGAAGATCTCAAGGCTCCTCTCTCGATCATCATTTTCTTCAATTTCTCGAGGTGGGAATGGTTACCTGGGTGCAACACTCTCTAAGTACAGTACTGCGTCTGCCGTTGAAGAACCCATTAAACCAGGAGTGGAAGTAGAACACACCCAGCTCTTAATTGATGGGAATTTCGTTGATGCTGCTTCTGGTAAAACTTTTCCAACGTTGGATCCCAGGACAGGGGAGGTGATTGCTCATGTTGCTGAGGGTAACTCTGAAGATGTTAATCGAGCAGTTGCAGCTGCGCGCAAAGCATTTGATGAAGGGCCGTGGCCTAAAATGACAGCCTATGAAAGGCAAAGGATAATGTTGCGTGCTGCTGATCTGATTGAAAAGCATAATGATGACATTGCAGCACTTGAGACTTGGGATAATGGGAAGACATATGAACAATCTGCTCAGATTGAAATTCCGATGCTGGTTCGCCTATTTCGTTATTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAATCCCAGCTGATGGGCCTCATCATGTGCAAACATTGCACGAACCCATTGGTGTTGCCGGTCAGATCATTCCTTGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTGGGACCAGCATTGGCCTGTGGCAACACTATTGTTCTGAAAACAGCTGAGCAGACACCATTATCTGCTTTGTATGTAGCAAAACTACTTCATGAGGCTGGACTTCCTTCTGGTGTTTTGAATGTAGTATCTGGCTTTGGTCCTACTGCCGGTGCTGCTCTTGCTAGTCACATGGATGTGGATAAGCTCGCTTTTACTGGTTCAACTGACACTGGAAAAGCCGTCCTTGAATTGGCAGCAAGAAGCAATCTTAAACCTGTAACCTTGGAGCTTGGTGGGAAATCCCCCTTTATTGTATGTGAAGATGCTGATATAGATCAGGCTGTTGAGCTAGCACACTTTGCCTTATTCTTTAATCAGGGACAATGTTGCTGTGCCGGGTCTCGAACATTTGTTCATGAGCGCATATATGATGAGTTCGTACATAAAGCAAAGGCTCGTGCAGCGAAACGTGCTGTTGGCGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGACCAATTTGAGAAAATACTGAAGTATATTAGATCCGGTGTTCAAAATGGGGCTACCCTTGAAACTGGGGGAGATAGACTTGGTGACAAAGGCTTCTATATTCAGCCTACTGTCTTCTCAAATGTCCAGGATGACATGGTGATTGCAAAGGAAGAGATCTTTGGTCCAGTGCAAACCATATTAAAGTTCAAGGACCTTCGTGAGGTAATTCAAAGAGCAAATAACACACGTTATGGCCTTGCAGCTGGGATCTTCACAAAAGACATAGACACTGCAAATACATTGACTCGAGCATTGAAGGTTGGAACAGTGTGGGTAAATTGCTTTGATACATTTGATGCTGCAATTCCCTTTGGTGGATACAAGATGAGTGGACAGGGTAGAGAAAAAGGAGAGTACAGTCTTAAGAACTACTTGCAAGTGAAGGCTGTTGTTACGCCCTTGAAGAACCCAGCATGGCTTTGA 1602 0.4494 MASALKISRLLSRSSFSSISRGGNGYLGATLSKYSTASAVEEPIKPGVEVEHTQLLIDGNFVDAASGKTFPTLDPRTGEVIAHVAEGNSEDVNRAVAAARKAFDEGPWPKMTAYERQRIMLRAADLIEKHNDDIAALETWDNGKTYEQSAQIEIPMLVRLFRYYAGWADKIHGLTIPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVAKLLHEAGLPSGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKAVLELAARSNLKPVTLELGGKSPFIVCEDADIDQAVELAHFALFFNQGQCCCAGSRTFVHERIYDEFVHKAKARAAKRAVGDPFKGGIEQGPQIDSDQFEKILKYIRSGVQNGATLETGGDRLGDKGFYIQPTVFSNVQDDMVIAKEEIFGPVQTILKFKDLREVIQRANNTRYGLAAGIFTKDIDTANTLTRALKVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2826 533 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Lja4g2826 533 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 23 533 - -
Lja4g2826 533 Pfam Aldehyde dehydrogenase family 61 523 IPR015590 GO:0016491
Lja4g2826 533 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 23 533 - -
Lja4g2826 533 CDD ALDH_F2BC 50 525 - -
Lja4g2826 533 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 299 306 IPR029510 GO:0016491
Lja4g2826 533 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 523 IPR016162 GO:0016491
Lja4g2826 533 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620
Lja4g2826 533 SUPERFAMILY ALDH-like 49 527 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2826 Lja-Chr4 47518958 47522604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2826 3 533 Aldehyde Dehydrogenase Gene Family AT3G48000 76.723 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2826 K00128 - gmx:100786773 946.421