Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2798 ATGGGCCAAAACGAAGTCGCTGTTGAATCACCATTGCTAACCAGCAACAAAGATGATGATGATGATGATGATGAGAAGAATCTTCGTGGTGCAGCAGCATCGTTCACTGGCTCTGTCTTCAATCTATCAACCACCATCATCGGTGCTGGAATCATGGCCTTACCCGCAGCCATCAAAGTTCTCGGCGTCGCTGCGGGCATTGCTGCAATCATCTTCCTCGCTTTCCTCACTGAGACTTCTCTCGACATTCTCATGAGGTTTAGCAGAGTTGGCAATGCTAGGTCTTATGGCGATGTCATGGGTTACGCTTTTGGTTGGGTTGGAAGATTGGTTCTTCAGATTTCTGTTCTTATCAACAACTTTGGGATTCTCGTTGTCTACGTGATCATAATTGGTGATGTGCTGTCTGGAACATCTTCAACTGGAATTCATCATTTCGGTGTTTTGGAAGGATGGTTTGGTGAACATTGGTGGACTGGACGCGCTTTCGTTCTTCTTGTCGCGACCATTTTGGTATTTACTCCTTTGGGGTTTTTTAAGAGGATAGATTCATTGAGATATACTTCTGCTTTAGCGGTGGCTCTGGCAGTTATGTTTCTTGTCATAATTGCAGGAATCACAATTGTGAAGTTGTTTAATGGCAGTATAGAGCGTCCCAGGTTACTTCCCAATATCACTGATGCTACATCTATATGGAATCTCTTTACTGCAGTTCCAGTTCTTGTGACAGCGTTTGTTTGTCATTACAATGTGCATACCATAGACAATGAGCTAGGAGAATCTTCCCCTATACAACCAGTTGTACGTGCATCACTGGTTCTGTGTTCTCTTATCTATATTCTCACAGCCTTATTTGGATTTCTCCTATTTGGTGAGTCTACCCTTGATGACGTGCTTGCCAACTTTGATACTGATCTGGGCATCCCTTATAGCAGTCTGCTCAATGACATTGTTCGTATCAGCTACGCCCTCCACCTCATGCTTGTTTTCCCAGTTATCTTCTTTTCGCTGCGCTTCAATTTGGATGATCTTATCTTTCCTTCAGCTAGGTCATTGGATTTAGATAGGTGTAGGTTTGTCTTCATCACCACTGGACTCATTGCTTTGCTCTATGTGGCTGCCAATTTTGTACCTAGCATCTGGACTGTTTTTCAATTCACTGGAGCAACTGCCACTGTTTGCCTTGGGTTTATTTTCCCTGGTGCAATTGCTCTAAGGGACCCCCAAGGTGTTGCAACGAAGAAGGACAAAATTTTATCCATTGTCATGATTTTTCTGGCTGTCTTCTCAAACGTTGTGGCTATATACAGCAATGCCGATGCCTTGTTCAGAAAACATGTTGATCCTCACCATTCATTATCAGAAAAATTGTCTCTACTGATCTACTCTCAAGACATTTAA 1401 0.4311 MGQNEVAVESPLLTSNKDDDDDDDEKNLRGAAASFTGSVFNLSTTIIGAGIMALPAAIKVLGVAAGIAAIIFLAFLTETSLDILMRFSRVGNARSYGDVMGYAFGWVGRLVLQISVLINNFGILVVYVIIIGDVLSGTSSTGIHHFGVLEGWFGEHWWTGRAFVLLVATILVFTPLGFFKRIDSLRYTSALAVALAVMFLVIIAGITIVKLFNGSIERPRLLPNITDATSIWNLFTAVPVLVTAFVCHYNVHTIDNELGESSPIQPVVRASLVLCSLIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRISYALHLMLVFPVIFFSLRFNLDDLIFPSARSLDLDRCRFVFITTGLIALLYVAANFVPSIWTVFQFTGATATVCLGFIFPGAIALRDPQGVATKKDKILSIVMIFLAVFSNVVAIYSNADALFRKHVDPHHSLSEKLSLLIYSQDI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2798 466 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 8 449 - -
Lja4g2798 466 MobiDBLite consensus disorder prediction 1 25 - -
Lja4g2798 466 PANTHER AMINO ACID TRANSPORTER 8 449 - -
Lja4g2798 466 Pfam Transmembrane amino acid transporter protein 33 438 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2798 Lja-Chr4 46318261 46322914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2798 3 446 Amino Acid or Auxin Permease AAAP Family AT3G30390 62.387 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2798 K14207 - gmx:100778699 689.108