Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2777 ATGGGTGCGGGAGGTCCTGATGATGAGGACAGTCATAGATGGCCGCCATGGTTGAAGCCTCTGCTTAAAGAGAGCTTCTTTGTTCAATGCAAGATGCACGCGGATTCACACAAGAGCGAGTGTAATATGTACTGCTTGGATTGTATGAACGGTGCACTCTGCTCTCTCTGCCTCGCTTACCACAAAGATCACCGTGCTATCCAGATAAGGAGGTCCTCATACCATGATGTGATTCGGGTCAATGAGATTCAGAAGGTTTTGGACATCTCAGGGGTGCAAACCTACATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCAGGGAAAGGGGTCACCAACACTTGCGAAGTCTGCGAGCGCAGCCTCCTCGATTCATTTCGATTCTGTTCTCTTGGTTGCAAGATTGTTGGTACATCAAAGAATTTCCAGAAGAAGAAGAAATCACCAGCAATGGCGGCAATGGCTTCAGACTCAGAGGATTCATACGGCAGCAGTAGCAGCTATGGAGGACTGAAGAACATCAAGGTGCAGAGCTTCACTCCTTCAACGCCGCCACCAACTTCACCACCAACTTCAGTTAATTACCGAACGGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGGCTAGCTCTGCAATACTAG 672 0.4926 MGAGGPDDEDSHRWPPWLKPLLKESFFVQCKMHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKKKKSPAMAAMASDSEDSYGSSSSYGGLKNIKVQSFTPSTPPPTSPPTSVNYRTAKRRKGIPHRAPMGGLALQY* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2777 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 219 - -
Lja4g2777 223 MobiDBLite consensus disorder prediction 180 223 - -
Lja4g2777 223 Pfam PLATZ transcription factor 70 141 IPR006734 -
Lja4g2777 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2777 Lja-Chr4 45470201 45472851 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lja4g2777 PLATZ 2.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2777 - - vra:106774881 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2777 4 45470201 45472851 Lja4g2777 4 45470201 45472851 ECH
Lja4g2777 4 45470201 45472851 Lja4g2777 4 45470201 45472851 PCT