Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2760 ATGCCCTTCCATGCTTGCAGAGCTTCCTATGCTCTCCCCGTGCGCCTTTGGGATTCCCAAACAGGCAACTTAGCAAGCTTTACAACAACCTTTTCTTTCGCGGTGTCAACAAATGGAATCACAATCGGAGACGGTGTCTCCTTCTTCATATCACCATTCCACTCTGAAATTCCCAAAGATTCAAGTGGTGGCTATCTTGGACTCTTTAGTGCTGACACTGCATTCAGATCCTTCCAAAACCCGATAGTCGCGGTTGAATTTGACACGTTCCAGAATCAATGGGATCCTCCCTATCCACACATAGGCATTGACATAAACTCAATTGATTCAGTAACGCAAGTGCAGTGGAATAATGAAAATTTGGAGAAAGATATAACAATAGTGCTTGCTACTATCAGCTATGAACCTGTGGCACGTAATTTGAGCGTTGTTGTGAGTTACCCTGATGAAAGTGAAGTGAATGGCTCTCCTCCTGCTACAATTAGCCTCTCACATGTGATTGATATGAAGAGAGTTCTGCCGGAATGGGTAAGCGTTGGCTTCTCTGGTGCCACCAGACGCTTGGTTGAAGAACACAACATTCTTTCTTGGAGTTTCAGTTCTAGCTTGTAA 612 0.4444 MPFHACRASYALPVRLWDSQTGNLASFTTTFSFAVSTNGITIGDGVSFFISPFHSEIPKDSSGGYLGLFSADTAFRSFQNPIVAVEFDTFQNQWDPPYPHIGIDINSIDSVTQVQWNNENLEKDITIVLATISYEPVARNLSVVVSYPDESEVNGSPPATISLSHVIDMKRVLPEWVSVGFSGATRRLVEEHNILSWSFSSSL* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2760 203 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 3 201 - -
Lja4g2760 203 CDD lectin_legume_LecRK_Arcelin_ConA 7 203 IPR001220 GO:0030246
Lja4g2760 203 ProSitePatterns Legume lectins beta-chain signature. 83 89 IPR019825 -
Lja4g2760 203 Gene3D - 1 203 - -
Lja4g2760 203 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 3 201 - -
Lja4g2760 203 SUPERFAMILY Concanavalin A-like lectins/glucanases 5 202 IPR013320 -
Lja4g2760 203 ProSitePatterns Legume lectins alpha-chain signature. 173 182 IPR000985 -
Lja4g2760 203 Pfam Legume lectin domain 6 202 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2760 Lja-Chr4 44352975 44353586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2760 4 203 Receptor kinase-like Gene Family AT5G10530 39.713 8.81e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2760 - - aprc:113871630 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2760 4 44352975 44353586 Lja4g2756 4 44235650 44237810 PCT