Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2759 ATGGCTACTAGTGCCAGATTCAGCTATTCATATATCCTTGCACTGTTCTTCTTGCCCTTCATTTCTTTCACCTTCCATGCTAATTCAATTCAGTTCAAAATTCCCAATTTCAGCCCTGCTGGTAATCCCAACATACTCTACCTAGGATCTGCAGGAAATAGTGAAGGAGAAGTTAAATTTAACCTTAATGATGCGTATGTAAGTCAAGTTGGATGGGCAATCTATGCTGAAAAAGTGTTGCTTTGGGACTCAGACACAGGTCAACTCACTGACTTCACAACACATTACACCTTCATTATTGACACTCAAGGTCAATCTAAGTATGGCCATGGACTTGCCTTTTTTCTTGCTCCAGTTGGAATTGAAATCCAACCAAATTCAGCTGGTGGCTTTCTTGGCCTATTCAACACCACAACTATGTTTTCATCATCCCATAGCAAAATTGTTCATGTGGAGTTCGATTCTTACCCAAATCCTGAATTTAATGAAACGGTGCAGCATGTGGGAATCAACAATAACTCAGTATTTTCATCAAAATGGACACCTTGGAATGCTAGCTTACACAGCACAGACACTGCTGATGTATCAATTAGCTACAATTCAGCAACCAAGAATTTAAGCGTGTCTTGGAAATATCAGATCACTTCTGATCCTCAAGAAATAACTAGCCTTTGGTATCAAATTGATTTGAGTAAGGTCCTTCCTGAATGGGTTACAGTAGGATTTTCTGCAGCAACAGGTTCGGTCTTCGAAAAGCATAATCTTCTGTCATGGGAATTCAACTCCACCTTGGAAAGTAGTAAAAGTAATACAAAGAAGACAAGGTTAGCTGTGATTGTATCTGTCTCTTGTGGTGTTATAGTACTGCTAGCCATAATTGCAATTGCAACATATGCATTATTTTGGAGGAAGAGAAAGAAAAGCGAAGATGAGGCTATGAATTTAACATCAATGAATGATGACATTGAAAGAGGAGCAGGGCCAAGGAGATTCTCCCACAGAGAACTCGCTTCCGCTACCAATAACTTCTCCAGAGACCGGAAACTCGGTCAAGGTGGGTTTGGAGCGGTTTACAGAGGCTACTTTGCTGATTCAGACTTAACAGTTGCTGTGAAGAGAATCTCAAAAGGGTCAAGACAAGGGAAGAAAGAGTATCTAACAGAAGTGAAAGTCATCAGCCAACTCCGGCACCGGAATCTCGTGAGACTAATCGGTTGGTGCCATGACCGAGGCGAGTTTCTCCTCCTTTATGAGTTCATGCCAAACGGAAGCCTTGATGCTCATTTATTTAGTAAGAGGATAACACCTCTTGCTTGGAGCGTGAGGCACAAGATAGCTCTTGGATTGGCCTCTGCAGTGCTTTATTTACATGAAGAATGGGAAAGATGTGTGGTCCATAGAGATATCAAGTCAAGCAATGTTATGCTAGATTCTAGTTTTAATGTGAAACTTGGTGACTTTGGGCTGGCTAAGCTCATGGACCACGAACTGGGCCCCCAAACAACTGGGCTTGCTGGAACATTGGGCTACATGGCTCCAGAATATGTGAGCACAGGGAGGGCAAGCAAAGAGTCTGATGTGTATAGCTTTGGGGTGGTTGCTTTGGAAATTACTACAGGGAAAAAAGCTGTTCATGTGATGGAGGATAGAGATGGAGATCAAAAGGGATTGATTGAGTGGGTTTGGGATCATTATGGCAGAGGAGAGGTAGTTATGGCTATGGATGAGAGTTTGCAGAAGGATTTTGATTTGAAACAGGTTGAGTGTTTGATTATTGTGGGACTGTGGTGTTCTCACCCTAATGTGAATCTCAGACCGTCGATAAGACAGGCAATTCAAGTACTTAATTTCGAGGCTGCTATGCCAAACCTTCCTCCGAAAAGGCCGGTCGCGACTTACAATGCTCCTACACCATCTGTAAGCTCCGTAGAACCATCCATAACCACTAGCCTTCATATTGGTCGTTGA 1968 0.4253 MATSARFSYSYILALFFLPFISFTFHANSIQFKIPNFSPAGNPNILYLGSAGNSEGEVKFNLNDAYVSQVGWAIYAEKVLLWDSDTGQLTDFTTHYTFIIDTQGQSKYGHGLAFFLAPVGIEIQPNSAGGFLGLFNTTTMFSSSHSKIVHVEFDSYPNPEFNETVQHVGINNNSVFSSKWTPWNASLHSTDTADVSISYNSATKNLSVSWKYQITSDPQEITSLWYQIDLSKVLPEWVTVGFSAATGSVFEKHNLLSWEFNSTLESSKSNTKKTRLAVIVSVSCGVIVLLAIIAIATYALFWRKRKKSEDEAMNLTSMNDDIERGAGPRRFSHRELASATNNFSRDRKLGQGGFGAVYRGYFADSDLTVAVKRISKGSRQGKKEYLTEVKVISQLRHRNLVRLIGWCHDRGEFLLLYEFMPNGSLDAHLFSKRITPLAWSVRHKIALGLASAVLYLHEEWERCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHELGPQTTGLAGTLGYMAPEYVSTGRASKESDVYSFGVVALEITTGKKAVHVMEDRDGDQKGLIEWVWDHYGRGEVVMAMDESLQKDFDLKQVECLIIVGLWCSHPNVNLRPSIRQAIQVLNFEAAMPNLPPKRPVATYNAPTPSVSSVEPSITTSLHIGR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2759 655 SUPERFAMILY Protein kinase-like (PK-like) 327 634 IPR011009 -
Lja4g2759 655 SMART serkin_6 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2759 655 PANTHER PUTATIVE-RELATED 24 654 - -
Lja4g2759 655 Pfam Legume lectin domain 30 273 IPR001220 GO:0030246
Lja4g2759 655 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Lja4g2759 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Lja4g2759 655 PANTHER - 24 654 - -
Lja4g2759 655 CDD STKc_IRAK 349 616 - -
Lja4g2759 655 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 272 IPR013320 -
Lja4g2759 655 CDD lectin_legume_LecRK_Arcelin_ConA 30 264 IPR001220 GO:0030246
Lja4g2759 655 Gene3D - 27 287 - -
Lja4g2759 655 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
Lja4g2759 655 Pfam Protein kinase domain 344 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2759 655 Gene3D Transferase(Phosphotransferase) domain 1 420 637 - -
Lja4g2759 655 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Lja4g2759 655 ProSiteProfiles Protein kinase domain profile. 343 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2759 Lja-Chr4 44330547 44335279 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2759 9 634 Receptor kinase-like Gene Family AT5G10530 58.517 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja4g2759 Pkinase 8.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2759 - - mtr:MTR_8g067690 932.169