Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2757 ATGAACAACCCTACTGTACAAATCGTTTCTGAATGCTTCATCAAGCCGCAAAGCCCCATCAAAGATTCAAACCAAGATGTAACCATATTGTCTCTACACTACATGCAATTTGGCCTGCTCTTCAAGAAGCCCGCATCTGTTGTGAATCAACAAGATTTCATGAATAATATCCTAGATAAACTCAAACACTCTCTTTCACTCGCCCTCGTCCATTTCTATCCACTCGCGGGTCGCCTTGTTACCAAGAAAACCCAAGACCCTCCCTCTTATGCAGTTTTTATTGATTGCATAAATAGTTCTGGTGCTAGATTTATTCATGGACCATATCTGATATCATTTCCACAATTGATGTCCCACCCATTGTTCACTCGATCATTTTTTGACCACCACAAAGCACTTAACCATGATGGTCACACCATGCCTTTGTTGTCAATCAAGGTTACTGAACTAGTAGATGGTGTTTTCATTGCTTGTTCCATGAACCACTGTGTTGCTGACGGGGCTGGTTTCTGGAATTTTTTCAATACATGGTCTGAGATCTTTCAAGCTCATCAAGGGTATGATTATGAATGTGGATTTGATGTGCCCATTTCGCGTAAACCAGTCCTCGATCGATGGTTTCCAAAAGGTTGCGGTCCGCTGATAAATCTCCCCTTGAAACATCATGATGATCATGAATTTATTTGCAGGTACGAATCGCCCAAGTTGAGAGAGAGAATCTTCCATTTTTCAGCGGAGTCTATTGTGAAATTGAAAGCAAAGGTTAACGGAGAGCAGCCATTTAATGCAATGAAAATCTCTTCATTCCAATCATTATCAGCATTTGTTTGGAGATCTATCACGCGTGCGCGCAACCTTCCACGTGATAAGGTAACAAAATGCAAGTTGGCCGCAAACAACCGATCAAGAATCGAACCGCCTTTGCCTGAGGAGTACTTCGGAAACTCGGTTAGCGCGGTCATTGTTGAAGCGACTGCGGGGGAGTTGGTTGAGAATAATCTAGGATGGGCGGCATGGAAGCTGCATGTGGCTGTTGCAAACCACAATGATGGGGTGGTGCAGCAGTGGCTCAAAGATTGGTTACAATCTCCTATGACATTTCAAGTGGACATGTTGCTGGAACCGAACATTTGGATAGGGAATTCACCAAGGTTCAATGTGTATGGGAATGAATTTGGAATGGGGAAAGCATTGGCGGTTAGAAGCGGTTACGCAAACGAAAGTGATGGGAAAGTGTACTCATATCCAGGTAGAGAGGGAGCGGGAAGCATTGATTTGGAGGTGTGTCTTTTGCCAGATACAATGACCGCGCTCGAATCAGATGAGGAGTTCATGAGTGTAGCTTCAGTGTGCAATCCCTTATTCTAG 1368 0.4379 MNNPTVQIVSECFIKPQSPIKDSNQDVTILSLHYMQFGLLFKKPASVVNQQDFMNNILDKLKHSLSLALVHFYPLAGRLVTKKTQDPPSYAVFIDCINSSGARFIHGPYLISFPQLMSHPLFTRSFFDHHKALNHDGHTMPLLSIKVTELVDGVFIACSMNHCVADGAGFWNFFNTWSEIFQAHQGYDYECGFDVPISRKPVLDRWFPKGCGPLINLPLKHHDDHEFICRYESPKLRERIFHFSAESIVKLKAKVNGEQPFNAMKISSFQSLSAFVWRSITRARNLPRDKVTKCKLAANNRSRIEPPLPEEYFGNSVSAVIVEATAGELVENNLGWAAWKLHVAVANHNDGVVQQWLKDWLQSPMTFQVDMLLEPNIWIGNSPRFNVYGNEFGMGKALAVRSGYANESDGKVYSYPGREGAGSIDLEVCLLPDTMTALESDEEFMSVASVCNPLF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2757 455 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 448 - -
Lja4g2757 455 Pfam Transferase family 6 445 - -
Lja4g2757 455 Gene3D - 5 217 IPR023213 -
Lja4g2757 455 Gene3D - 234 444 IPR023213 -
Lja4g2757 455 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2757 Lja-Chr4 44286589 44287956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2757 6 439 Monolignol Biosynthesis Gene Families AT5G48930 28.200 2.02e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2757 - - gmx:100792511 602.053