Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2756 ATGTTTCCAATATTCATCATCTTCACATGTTGTTCCTACGCACTCTTCAACACAGTAGACTCAATTTCCTTCAACTACACCACTTTCCAACCAAACCTTTATCTAATACATTTCGAGGGTGATGCCTTTTCCTCAAACGATGTTCTGCAGCTCACAAAGAACCAGCTCGATGGCCCGATCACAAGAAGCGTTGGTCGAGCCTCGTTCGACCAACCTGTGAAGCTTTGGGACAGAGAAACAAATGAGCTAGCAGATTTCACCACCCATTTTTCATTTGTCATGAAATCTGTTAATGAATCGCGATACGGTGATGGCTTATCCTTCTTCATTGCTCCATTTCAATCTTCAATCCCAAACAACTCAGCTGGTGGGTTCCTTGGTCTGTTCAGCGAGGAATCAGCATTGAACACTAGCAAGAATCAAATAGTTGCAGTTGAGTTTGACAGTTTCAAGAATGACTGGGATCCAAGCTCGAATCATGTTGGAATTAATGTTAATTCCATCGAATCGGTTGAGAATGTGACTTGGAATAGCAGCATGAGAAACGGGAGAGTTGGTAATACTTGGATATCATATAATGCTACCTCAAAGAATCTCTCTGTGTTTCTTACTTATGCCAACAATCCAAAGTTTAGCGGCAATTCTAGTCTTTGGCATGTTATTGATTTGAGGGAGGTTCTGCCAGAATTTGTTAGGATTGGATTCTCCGCCGCCACGGGTCAGTGGATTGAGTTACATAACATACGTTCTTGGTCATTCAATTCAAGTTTGGATAATAATGGTGGTGGGAAAAACAACAAGGTTGAAATAGGAGTTGGAATAAGTGCTGGTTTTGGCTCTTTAACTTGTGTTATGGGTCTGCTATGGTTCATCTTTTGGAGGAAAAGAAATGGGCCAAAAGGGGAAGATTTTGATGCTTCTATGGATGATGAATTTGAGAGAGAAGCTGGTCCTAAAAGGTTCACCTACAAGGAACTAAGCAATGCAACAAAGGGCTTTGATGAGGCAGGAAAGCTTGGAGAAGGTGGATTTGGAGGTGTTTACAAAGGTGCTCTTGGAAAATCCAACCTCGAAGTGGCGGTGAAGAGGGTTTCAAAAGGATCAAAACAAGGGAAAAAGGAATACATATCAGAAGTAAGAGTAATCAGCAGGGTGAGACACAGAAATTTGGTTCAACTGTTAGGGTGGTGTCATGAGCAAGGAGAGCTTCTTCTTGTTTATGAATACATGCCTAATGGAAGCCTTGATTTTCATCTATTTAAAAACAAAGTCATGCTTACTTGGACAATAAGGTACAAGGTAGCCCTGGGTTTGGCATCAGCCATTCTTTATCTTCATGAAGAGTGGGAACAGTGTGTGGTGCATAGAGATATTAAGTCAAGTAATATAATGCTCGATGCAAATTTCAATGCCAAGTTGGGTGACTTTGGTCTTGCAAGGCTGGTAGATCATGAACTTGGCTCTCAAACCACTGTTTTGGCTGGGACAATGGGGTATCTAGCTCCAGAGTGTGTCACAACTGGGAAATCAAGCAAGGAATCTGATGTTTACAGCTTTGGTGTTGTTGCACTTGAAATCACATGTGGTAGAAGACCAGTTGACTTAAAACAAGAGCCTGGTAAAGTTAGGCTTGTGGAGTGGGTTTGGGAGCTCTATGGAAAAGGGAAGCTAGGTGAAGCAGCTGATGAGGAGTTGAATTGGGGATTTGATGGGAGGCAAATTGAATGCTTGATGATAGTTGGCCTGTGGTGTTGTCATCCAGATCATACCATGAGGCCCTCTATTAGGCAAGTGATAAGTGTCCTCAATTTTGAAGCTCCTTTGCCTAGTCTTCCATCAAAGTTGCCTGTGCCAATGTACTATGCACCTCCCATGGAGATGTGCAAATTCTCATACACTACATCAGGAATCTCAAGTACAACCAATGGATCTTCCACCTACTCATCATTGTCTGCAGGGTCCAGAAAATCTCTATTGTAG 1980 0.4222 MFPIFIIFTCCSYALFNTVDSISFNYTTFQPNLYLIHFEGDAFSSNDVLQLTKNQLDGPITRSVGRASFDQPVKLWDRETNELADFTTHFSFVMKSVNESRYGDGLSFFIAPFQSSIPNNSAGGFLGLFSEESALNTSKNQIVAVEFDSFKNDWDPSSNHVGINVNSIESVENVTWNSSMRNGRVGNTWISYNATSKNLSVFLTYANNPKFSGNSSLWHVIDLREVLPEFVRIGFSAATGQWIELHNIRSWSFNSSLDNNGGGKNNKVEIGVGISAGFGSLTCVMGLLWFIFWRKRNGPKGEDFDASMDDEFEREAGPKRFTYKELSNATKGFDEAGKLGEGGFGGVYKGALGKSNLEVAVKRVSKGSKQGKKEYISEVRVISRVRHRNLVQLLGWCHEQGELLLVYEYMPNGSLDFHLFKNKVMLTWTIRYKVALGLASAILYLHEEWEQCVVHRDIKSSNIMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRRPVDLKQEPGKVRLVEWVWELYGKGKLGEAADEELNWGFDGRQIECLMIVGLWCCHPDHTMRPSIRQVISVLNFEAPLPSLPSKLPVPMYYAPPMEMCKFSYTTSGISSTTNGSSTYSSLSAGSRKSLL* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2756 659 Pfam Protein kinase domain 334 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2756 659 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Lja4g2756 659 ProSitePatterns Legume lectins alpha-chain signature. 227 236 IPR000985 -
Lja4g2756 659 CDD lectin_legume_LecRK_Arcelin_ConA 22 257 IPR001220 GO:0030246
Lja4g2756 659 Gene3D Transferase(Phosphotransferase) domain 1 410 623 - -
Lja4g2756 659 MobiDBLite consensus disorder prediction 638 659 - -
Lja4g2756 659 PANTHER RECEPTOR LECTIN KINASE 15 635 - -
Lja4g2756 659 SMART serkin_6 333 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2756 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Lja4g2756 659 SUPERFAMILY Protein kinase-like (PK-like) 314 604 IPR011009 -
Lja4g2756 659 CDD STKc_IRAK 347 603 - -
Lja4g2756 659 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Lja4g2756 659 Gene3D Phosphorylase Kinase; domain 1 318 409 - -
Lja4g2756 659 PANTHER - 15 635 - -
Lja4g2756 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 257 IPR013320 -
Lja4g2756 659 ProSiteProfiles Protein kinase domain profile. 333 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2756 659 Gene3D - 19 271 - -
Lja4g2756 659 Pfam Legume lectin domain 22 260 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2756 Lja-Chr4 44235650 44237810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2756 19 621 Receptor kinase-like Gene Family AT5G10530 51.378 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja4g2756 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2756 - - gmx:100777201 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2760 4 44352975 44353586 Lja4g2756 4 44235650 44237810 PCT
Lja4g2756 4 44235650 44237810 Lja4g2756 4 44235650 44237810 PCT