Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2739 ATGATGCGATTCATGCTTTCAACTTACTGTTACTTGTTGCAGAACTTGCTAACTATGAGATGCCAAAGGCCTTTTTCTGAAGCTGGTGATGAAGTCAATGTTCATTATACTGGAACATTGCTTGATGGCACCAAATTTGATTCCAGCAGACATAGGGGAATCCCTTTCGATTTCACTCTTGGACAAGGGCAAGTTATTAAGGGATGGGATGAAGGGATTAAAACCATGAAGAAAAGTGAAAATGCCCTTTTCACAATCCGAGCTGAACTAGCAAGGATCCTGATGAAGTCACGTAACTTGCAGGTGTCTTGTCAAAAAGCATCTGCAAGTTACTTAAAAAGAAGTGAAGAGACCACCCCATCTTGTTCTTTCACTTGA 378 0.4074 MMRFMLSTYCYLLQNLLTMRCQRPFSEAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQGQVIKGWDEGIKTMKKSENALFTIRAELARILMKSRNLQVSCQKASASYLKRSEETTPSCSFT* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2739 125 Gene3D - 20 124 IPR046357 GO:0003755
Lja4g2739 125 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 29 91 IPR001179 GO:0003755
Lja4g2739 125 PANTHER PEPTIDYLPROLYL ISOMERASE 24 91 - -
Lja4g2739 125 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 27 91 IPR001179 GO:0003755
Lja4g2739 125 SUPERFAMILY FKBP-like 25 91 - -
Lja4g2739 125 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 24 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2739 Lja-Chr4 43529687 43531152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2739 13 91 Calmodulin-binding Proteins AT5G48570 71.250 4.60e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2739 K09571 - gmx:100803189 117.472