Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2733 ATGTGTCCGTTCACTGCCTTAGTAGTCGCTAGGTCAGTCTGTTCCCTTTCTTTCTTCTTCCAAAACACACTCCACGAGTCCACGGTTTTCTCAAACCTGTTTGCCCTAGATCCATGGCTTCCATGCCTAACCCACGCATCTCTTGCTAAGTTCAGTGCGTCCCTTTTCTGTACTTTTTCCCTTTGGGTGCTGGGAAAGCCTTCTGGTGTTCTGTACTCAAGGTACCATGCCTTGGAATCCCACTTTCACATGGTTCTGAGGATCTCGGTTAAATGTTACATGCAGCAACTTTTACACGGACTTGATCACTGCCACGACCGTGGTGTACTGCACCGTGACATTAAGGGATCCAATCTTTTGATTGACAATAATGGAATGTTGAAAATTGCAGACTTTGGTTTAGCAAGCTTTTTCGATCCTAATAAAATTCAGCCACTGACAAGCCGAGTTGTCACTCTTTGGTATAGGCCGCCTGAGCTTCTACTCGGAGCTACTTATTATGGCACTGCTGTAGATTTGTGGAGTACAGGTTGCATACTTGCTGAGCTATATGCAGGCAAGCCTATAATGCCTGGTAGAACTGAGGTGGAGCAACTGCATAAAATTTTTAAACTTTGTGGTTCACCTTCCGAGGACTATTGGAGAAAATCTAAATTACCTCATGCCACAATATTTAAGCCTCAACAACCCTATAGGCGCTGTGTTGCTGAAACGTTCAAGGACTTTCCTGCACCTGCAATAGAACTGATCGAGACCCTTTTGTCCATAGATCCTACTGATCGTGGAACTTCAGCATCCGCGTTGAAGAGCGAGTTCTTCTCAACAAAGCCTCTGCCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCTAGCAAAGAATTTGATGCCAAAGTACGGGAGGAAGAAGCTAGAAGACAAGGAGCAGCAGGAAGCAAGGCCCAAAGACATGATCCTGAGAGAAGAGTAAGAGAATCTCGAGCAATTCCCGCACCTGAGGCCAATGCTGAACTGGTTTTGTCAATGCAGAAGAGACGAGGGCTGACTAGTTCTCAAAGCCGGAGTGAGAAGTTTAACCCTCATCCTGAAGAAGCTGCTTCTGGATTTCCCATTGACCCACCTAGACCATCACAAGCTGTAGAAGCAAATGCAGATCCCCAGATGCTTCAACATAAAAGAGCCTCTCATTCAGGTCCACTGACTCACCGCTCTGCATGGGCTAAAGCTGGGAAGAACCAGGATGACGTGCAAAAGATTTCAGCCGGAGGTGACTTATCAGCAGTTTCGGGCTTAGTCGCAGCCAGAAGGAGTATGTTGTCTGATGATCGCAGAGAAAGGTCTGGATCGTCACAAGCAGAGGCTCCAAAACTAATTAGCAGGTTCCCAGGATCTTTCAAGGAGGCTTCTGATTCGTTGATGCAAAAGGATCAGAAGCATCATCATATACATGCTTCTCAAAATGAAGAAGGAAGAGGCAGCAACAAAGACTCAAATCTTGTTGGTTATGGATCCAAGGGTTATAAAATTCATTATTCTGGTCCATTGCTAGTTCCATCAAACAACATGGATCAGATGTTGAAAGACCATGATCGCCAAATTCAGGAGGCAGTTAGAAGAGCGCGTCTGGACAAGGCGAAAATGAAAAGACTTCAAGCTGACAATTCATTATTTGTTTCTGGTCGTTAA 1683 0.454 MCPFTALVVARSVCSLSFFFQNTLHESTVFSNLFALDPWLPCLTHASLAKFSASLFCTFSLWVLGKPSGVLYSRYHALESHFHMVLRISVKCYMQQLLHGLDHCHDRGVLHRDIKGSNLLIDNNGMLKIADFGLASFFDPNKIQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAETFKDFPAPAIELIETLLSIDPTDRGTSASALKSEFFSTKPLPCDPSSLPKYPPSKEFDAKVREEEARRQGAAGSKAQRHDPERRVRESRAIPAPEANAELVLSMQKRRGLTSSQSRSEKFNPHPEEAASGFPIDPPRPSQAVEANADPQMLQHKRASHSGPLTHRSAWAKAGKNQDDVQKISAGGDLSAVSGLVAARRSMLSDDRRERSGSSQAEAPKLISRFPGSFKEASDSLMQKDQKHHHIHASQNEEGRGSNKDSNLVGYGSKGYKIHYSGPLLVPSNNMDQMLKDHDRQIQEAVRRARLDKAKMKRLQADNSLFVSGR* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2733 560 SUPERFAMILY Protein kinase-like (PK-like) 88 281 IPR011009 -
Lja4g2733 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 109 121 IPR008271 GO:0004672|GO:0006468
Lja4g2733 560 Gene3D Transferase(Phosphotransferase) domain 1 76 312 - -
Lja4g2733 560 SMART serkin_6 4 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2733 560 ProSiteProfiles Protein kinase domain profile. 1 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2733 560 MobiDBLite consensus disorder prediction 292 327 - -
Lja4g2733 560 Coils Coil 532 552 - -
Lja4g2733 560 MobiDBLite consensus disorder prediction 279 500 - -
Lja4g2733 560 PANTHER CELL DIVISION PROTEIN KINASE 88 546 - -
Lja4g2733 560 PANTHER CYCLIN-DEPENDENT KINASE 88 546 - -
Lja4g2733 560 MobiDBLite consensus disorder prediction 470 489 - -
Lja4g2733 560 Pfam Protein kinase domain 88 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2733 Lja-Chr4 42438019 42465192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2733 90 321 Core Cell Cycle Gene Families AT5G64960 53.648 3.33e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lja4g2733 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2733 - - gmx:100776578 833.172