Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2732 ATGGCTTTGAATATGATGCTTCAATCATGGTTAGTTTTGAGCCTTGTTTTAGTACTAGACGGTTTATCAGTACCAACCTGTCACTGCCAGACGAACATTGAAACTTTCTACCCCAATGAAACTTCAGCACCAGCCCCGGCAACACAACCGCCGGAGCCGCCACCACTACCACCACCAACACAAGGGCAGGCTCCGGGACCAGTGGTGGCGTCCCGGAGTACTTCATCGAATGGTAAGATCGCAAAGGCGGTGGCTGTAACTGCAGCAAGCACTTTGGTTGCTTGTGTTTTAATGTTCATTTTAGTCCAGAGGTGCTTAAGGGGAAGAAGAAAAAGAAAGGAAATCATGGTGAGTAACACTGGTGGTTCTGGTGGAGATAGGCGTGTTGTTCCTCAGGGAAATGCGTTTGAACGAATTGATGGGAATGTCAGGGGACTGATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAACTTGAAGGGAAAAACAACAACAACAACATGGATCTTCATAAGGAGGTCTTGCAAAGTCCCAAAAATGAAGAAGGAATAGAAGATGATCAACGTCAAGGGAAAAAAAATATCAAGTTCATCCAAGAAATTCCTCTGCTTCGTGGGAAATCTTCATCTTCCCACATGAAGATATCTCCAGAAGAGGATCAGCCATGTAGATTTGCAACAATTCCCTCTCCTCTTCCTTCATCTTCTTCTGTTCCTCGGGTATTAGGTGGAGTTGCTATCAAGGGTGTTCAGGAACCAGATTCTCCTTCTCAACCATCCACTCCACCCCCTCCAATTTCGCCATCAACACCATCCCCCATTTCTTTTCCAGCACCACCTGTCCCTCCTTCAATCCCAGCTAGACAGAGTCCAACACCACCTCCTCCGACGACGAAGACAGGTGCTTCGAATTCATCATCAAAAACACCACCTGGTCCCATTGAAATGCCAGTTATCTCCACCAGCAAGCAAGGAGACTCTTCAGGGAAAGGCATGCCAGAAACAAGCAATGATCAAGTGAAGCTGAAGCCTTTGCATTGGGATAAGGTGAATACTAATGCTGATCACTCCATGGTTTGGGACAAAGTTGATCGTGGATCTTTCAGTGTGGATCAAGATCTTATGGAAGCTCTCTTTGGTTATGTGGCCACGAACCGAAGATCCCCAAAAGGAAAGAATCACTCAACAAGTCCAAGCAGGGATACCTCTGCTCCATCAACAAAAATATTCCTTCTTGACCAGAGAAAATCACAGAACATTTCTATTATATTGAAATCTCTTGCAGTCTCACAAGGTGAAATTCTTGATGCGCTCGGCGATGGTAAAGGCCTCAACATGGAAACCCTTGAAAAGCTATCTAGAGTTTCCACAGCAGAAGAAGAGCAATCACTGATCCTTCAATACAAAGGAGACCCAGCAAGACTTGCTGCAGCTGAGTCTTTCATCTATCACATCCTTAAAGCGGTTCCTTCAGCATTCAAGCGCTTGAATGCGATGTTGTTCAGATTGAACTATGATTATGAGATTCTAGAAATCAAGGAATCTCTACAGACCATTGAACTGGGGTGTAAGGAGCTTAAAAGCCATGGAATCTTTGCGAAGCTTCTTGAAGCAGTGCTTAAGGCAGGAAATAGAATGAATGCAGGAACTGCTAGAGGTAATGCTCAAGCTTTTAACTTGGATTCTCTAAGAAAGCTTTCTGATGTCAAGAGCAGCAATGGAAATACCACATTACTTCACTTTGTGGTTGAAGAGGTAGTTCGTTCGGAAGGAAAACGTGTTGTTCTGAACCGCAATCACAGCCTGAGCCGTAGTAGTAGCAGTAGGAGTACTAGCAACATCAGCGGAGACTCCACGAGCAATGCTGCTTCAAATGGAGAAAGAGAAAGGGAATTTACAAAGCTAGGATTGCCAATTGTAGGAGGGATCAGTTCTGAGTTGTCAAACGTTAAGAAAGCATCACATATAGATTACAACAGTATAGTTGGTTCAATCTCAGCCCTCTCAACGCGGCTAGTTGAAATTCAAGAACTTGTTTCTCAGTGTGGAAATAGTGAAGGAGATTGTTTTGCAAAAGAAATGAACCATTTTCTCCGAAATGCTGAACAAGAATTGAAATTAGTGAGGGACAAAGAAGCAAGCACATTGCAGCTTGTCCATAGAACAACACAATATTATCAAGTAGTGGCTTCAAAAGACAATGCAGCACAAAGTCTCAAACTATTTGTTATAGTAAAGGATTTTATGGGGATGGTTGATCAAGCTTGCATTGAGATTGCGCGTGACATGCAGAAGAGGAAGACCCTCAAGTAA 2319 0.4368 MALNMMLQSWLVLSLVLVLDGLSVPTCHCQTNIETFYPNETSAPAPATQPPEPPPLPPPTQGQAPGPVVASRSTSSNGKIAKAVAVTAASTLVACVLMFILVQRCLRGRRKRKEIMVSNTGGSGGDRRVVPQGNAFERIDGNVRGLIVDEDGLDVVYWRKLEGKNNNNNMDLHKEVLQSPKNEEGIEDDQRQGKKNIKFIQEIPLLRGKSSSSHMKISPEEDQPCRFATIPSPLPSSSSVPRVLGGVAIKGVQEPDSPSQPSTPPPPISPSTPSPISFPAPPVPPSIPARQSPTPPPPTTKTGASNSSSKTPPGPIEMPVISTSKQGDSSGKGMPETSNDQVKLKPLHWDKVNTNADHSMVWDKVDRGSFSVDQDLMEALFGYVATNRRSPKGKNHSTSPSRDTSAPSTKIFLLDQRKSQNISIILKSLAVSQGEILDALGDGKGLNMETLEKLSRVSTAEEEQSLILQYKGDPARLAAAESFIYHILKAVPSAFKRLNAMLFRLNYDYEILEIKESLQTIELGCKELKSHGIFAKLLEAVLKAGNRMNAGTARGNAQAFNLDSLRKLSDVKSSNGNTTLLHFVVEEVVRSEGKRVVLNRNHSLSRSSSSRSTSNISGDSTSNAASNGEREREFTKLGLPIVGGISSELSNVKKASHIDYNSIVGSISALSTRLVEIQELVSQCGNSEGDCFAKEMNHFLRNAEQELKLVRDKEASTLQLVHRTTQYYQVVASKDNAAQSLKLFVIVKDFMGMVDQACIEIARDMQKRKTLK* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2732 772 MobiDBLite consensus disorder prediction 251 347 - -
Lja4g2732 772 SUPERFAMILY Formin homology 2 domain (FH2 domain) 347 769 - -
Lja4g2732 772 Coils Coil 693 713 - -
Lja4g2732 772 Gene3D Formin, FH2 domain 344 772 IPR042201 -
Lja4g2732 772 PANTHER FORMIN-RELATED 1 770 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lja4g2732 772 MobiDBLite consensus disorder prediction 600 628 - -
Lja4g2732 772 MobiDBLite consensus disorder prediction 38 73 - -
Lja4g2732 772 Pfam Formin Homology 2 Domain 338 754 IPR015425 -
Lja4g2732 772 MobiDBLite consensus disorder prediction 388 408 - -
Lja4g2732 772 SMART it6_source 331 769 IPR015425 -
Lja4g2732 772 MobiDBLite consensus disorder prediction 600 630 - -
Lja4g2732 772 MobiDBLite consensus disorder prediction 390 408 - -
Lja4g2732 772 ProSiteProfiles Formin homology-2 (FH2) domain profile. 334 772 IPR015425 -
Lja4g2732 772 MobiDBLite consensus disorder prediction 258 300 - -
Lja4g2732 772 PANTHER FORMIN-LIKE PROTEIN 1 770 - -
Lja4g2732 772 MobiDBLite consensus disorder prediction 44 64 - -
Lja4g2732 772 MobiDBLite consensus disorder prediction 322 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2732 Lja-Chr4 42429544 42432851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2732 80 770 FH2 protein (formin) Gene Family AT1G70140 45.804 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2732 - - vun:114178801 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2732 4 42429544 42432851 Lja4g2732 4 42429544 42432851 ECH