Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2722 ATGAAAGCATGGGATGGGATTCAATCTTCTTTCTCTTCTACTTCTAGATCGAGTTCCACCACCACCATGAGCCATCGAGCAACGTCTCAAACGGTTCGACTCGGCCGAGTTCAACCCCAAGCCCCAACTCACCGCACCATCTTCTGCAACGATCGCGAAGCCAATCTCCCCGTCCGCTTCAAGGGAAATTCAATATCAACTACAAAATACAACTTTCTCACCTTTCTGCCAAAAGGATTATTTGAACAGTTCAGGCGGGTGGCTAATCTCTACTTTCTTACAATCTCAATTTTGTCAACCACCCCAATTAGTCCTGTGTCTCCGATAACTAATGTGCTTCCACTATCTCTTGTGCTTCTCGTTTCTCTTATCAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGACCATAAACAATAATGTGGTAGATGTTTTGCAAGATCAGAAGTGGGAGTCTATACCATGGAAAAAGTTACAGGTTGGAGACATTATCAAGGTGAAGCAGGATGGATTCTTTCCTGCAGATCTGCTTTTCTTGGCCAGTACAAATGCAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGACGGAGAAACCAATTTGAAGATTAGGAAAGCACTGGAAAAGACTTGGGATTACCTGACTCCAGAGAAGGCGTCTGAGTTTAAAGGTGAAATTCAATGTGAGCAACCAAACAATTCATTGTATACCTTTACTGGAAACCTTTTAATTCAAAAGCAAACGCTTCCCCTCAGTCCAAACCAAATTTTGTTGCGAGGGTGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATTTTTACAGGACCTGAAACAAAGGTGATGATGAATTCAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGATAAGCTCATACTAGCTCTATTTGCTACTCTCTTTATGATGTGTTTTATTGGAGCTATAGGCAGTGCTATCTTCGTAAACAAAAAATATTTTTACTTACATCTTGATTCATCAGAGGAAGGCTCAGCACAATTCAATCCAAGAAACAGATTTTTGGTTTTTCTTCTGACTATGTTTACCCTTATCACCCTATACTCAACAATCATCCCCATTTCACTTTATGTTTCCATAGAGATGATCAAATTTATTCAGTCAACTCAATTTATCAACAAGGATTTGTGCATGTACCATAGTGAAACCAATACCCCTGCATTAGCTCGAACTTCAAATCTGAATGAAGAACTTGGGCAGGTGGAGTACATTTTCTCTGACAAAACTGGGACTCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGCGAAATCTATGGGAATGGTGTGACTGAAATTGAGAGGGGAATAGCAGAGCGCAATGGCATGAAAATTGAGGAAAATAGCTCTCCCACTGCTGCGCATGAGAGGGGTTTTAATTTTGATGATGCTAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCTAATCCTGATGTCTGCAGGGAATTCTTCAGATGCCTTGCTATATGTCATACTGTACTTCCTGAGGGCGATGAGTCCCCTGAGAAGATCAGGTATCAAGCTGCATCACCTGATGAGTCTGCTTTGGTTATTGCTGCGAAGCACTTTGGTTTCTTCTTCTACAGGCGCACACCAACCATGATATATGTTCGTGAATCTCATGTAGAGAAGATGGGTAAAGTTCAAGATGTATCTTATGAGATTTTAAATGTGCTCGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTTGTTTGTCGTTATCCAGATGGAAGGCTTGTACTATACTGTAAGGGTGCTGATAATGTAATCTACGAGAGACTAGCTGATGGTAGTAATGATATCAAGAAAATCACTAGGGAGCATCTAGAACAATTTGGATCCTCTGGACTACGTACATTATGCCTGGCCTACAGAGAATTGCATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTACATGATCGTGAAAAGAAATTAGATGAGGTGGCAGAACTCATAGAAAAAGATCTCGTTTTAATTGGTAGCACTGCAATAGAAGACAAGCTTCAAGAAGGAGTGCCTGCTTGCATTGAAACTCTTCAAAGAGCTGGTATTAAAATTTGGGTTCTAACAGGGGACAAGGTTGAAACAGCAATTAACATAGCCTATGCATGCAATTTAATAAACAATGAGATGAAGCAATTTGTTATCAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAGATTGCACGATTTATTAAGGAAGAAGTGAAAAAAGAACTGAAAAGGTGCCTTGAGGAAGCACAGAGCTATTTTCACTCCTTATCTGGACCAAAACTGGCACTTGTAATTGATGGAAAGTGTCTAATGTATGCATTGGATCCAAGTTTAAGAGTGATGCTGCTGAATTTTAGTTTGAATTGTCATGCTGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCGCAGGTCACAAGTATGGTTAAGAAAGGTGCAAAAAAAATAACTCTTAGTATTGGTGATGGAGCCAATGATGTAAGCATGATTCAAGCAGCTCATGTTGGTGTTGGCATAAGTGGAATGGAGGGAATGCAAGCTGTGATGGCTAGTGATTTTGCCATTGCACAGTTCCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGGTGGTCATATCTGCGAATATGCAAGGTGGTGATATACTTCTTTTACAAGAATCTCACATTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGGTTCTCTGGTCAAAGATTTTATGATGATTGGTTTCAGTCATTATATAATGTTATTTTCACGGCACTTCCTGTGATCATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTATCCAAGAAGTATCCTGAGCTATACATGGAGGGAATAAAAAATGTTTTCTTCAAATGGAAAGTTGTGGCTATATGGGCCTTTTTTTCTGTGTACCAGTCTCTCATATTCTACTATTATGTGAGTACGTCAAATTTAAGTGCGAAAAACTCAGCAGGAAAGATATTTGGACTCTGGGATGTCAGTACAATGGCCTTCACATGCGTCGTAGTAACCGTCAACTTGCGTCTACTTTTGATTTGTAATTCAATCACAAGATGGCACTATATTAGTGTTGGTGGAAGTATATTAGCTTGGTTTCTTTTTATTTTTATATATTCAGGGATTTCCACTCCTTATGATCGACAGGAGAATATTTATTTTGTCATATATGTCTTGATGAGTACCCTCTATTTCTACCTCACACTGCTACTAGTTCCTGTTTCTGCACTTTTCTGTGACTTTGTTTACCAAGGGGTTCAAAGATGGTTTTTCCCCTATGATTATCAGATTATTCAAGAAATTCATAGGCATGAGCTTGATAACACTGGCCGGGCACAACTGCTGGAGAGTCAGCTTACGCCAGCTGAGGCAAGGAGCTATGCTATATCTCAACTCCCTCGTGAGATATCAAAGCACACCGGGTTTGCTTTTGATTCACCTGGGTACGAGTCATTTTTCGCTGCACAGCTTGGAGTATATGCACCACCAAAGGCTTGGGACGTTGCAAGAAGAGCTAGCATGAAATCTCGGCCCAAGATTGGGCAACATAAGTAA 3681 0.404 MKAWDGIQSSFSSTSRSSSTTTMSHRATSQTVRLGRVQPQAPTHRTIFCNDREANLPVRFKGNSISTTKYNFLTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDWKRFQNDMTINNNVVDVLQDQKWESIPWKKLQVGDIIKVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLLIQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGPETKVMMNSMNVPSKRSTLERKLDKLILALFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPRNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLCMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGNGVTEIERGIAERNGMKIEENSSPTAAHERGFNFDDARLMRGAWRNEPNPDVCREFFRCLAICHTVLPEGDESPEKIRYQAASPDESALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKVQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADNVIYERLADGSNDIKKITREHLEQFGSSGLRTLCLAYRELHPDVYESWNEKFIQAKSSLHDREKKLDEVAELIEKDLVLIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKVETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKEEVKKELKRCLEEAQSYFHSLSGPKLALVIDGKCLMYALDPSLRVMLLNFSLNCHAVVCCRVSPLQKAQVTSMVKKGAKKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYMEGIKNVFFKWKVVAIWAFFSVYQSLIFYYYVSTSNLSAKNSAGKIFGLWDVSTMAFTCVVVTVNLRLLLICNSITRWHYISVGGSILAWFLFIFIYSGISTPYDRQENIYFVIYVLMSTLYFYLTLLLVPVSALFCDFVYQGVQRWFFPYDYQIIQEIHRHELDNTGRAQLLESQLTPAEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPPKAWDVARRASMKSRPKIGQHK* 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2722 1226 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 1134 IPR023298 -
Lja4g2722 1226 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 703 IPR023299 GO:0000166
Lja4g2722 1226 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 829 935 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja4g2722 1226 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 60 1142 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lja4g2722 1226 Pfam Phospholipid-translocating ATPase N-terminal 47 111 IPR032631 -
Lja4g2722 1226 Gene3D - 689 896 IPR023214 -
Lja4g2722 1226 SFLD Haloacid Dehalogenase 407 907 - -
Lja4g2722 1226 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Lja4g2722 1226 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Lja4g2722 1226 Gene3D - 556 688 IPR023299 GO:0000166
Lja4g2722 1226 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1134 IPR032630 -
Lja4g2722 1226 CDD P-type_ATPase_APLT_Dnf-like 62 1014 - -
Lja4g2722 1226 Pfam E1-E2 ATPase 142 381 - -
Lja4g2722 1226 Gene3D - 125 289 - -
Lja4g2722 1226 Pfam Cation transport ATPase (P-type) 522 616 - -
Lja4g2722 1226 MobiDBLite consensus disorder prediction 1 36 - -
Lja4g2722 1226 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 22 1222 - -
Lja4g2722 1226 SFLD p-type atpase 407 907 IPR044492 -
Lja4g2722 1226 SUPERFAMILY Calcium ATPase, transduction domain A 142 286 IPR008250 -
Lja4g2722 1226 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 22 1222 - -
Lja4g2722 1226 SUPERFAMILY HAD-like 413 898 IPR036412 -
Lja4g2722 1226 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2722 Lja-Chr4 41990897 42022103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2722 13 1222 Primary Pumps ATPases AT1G59820 79.455 0.0 2072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2722 K14802 - gmx:100815547 2282.68