Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2716 ATGTTATTGAGATCATGGGAAAGAGTGAGTGATGACGTGAAGCTGTTGGGGGCATGGCAAAGTCCAGTTACACTGAGAGCAAGGATAGCTCTTAACATCAAATCGGTTGAGTATGAGTTCATTGAGGAATCATTTGAGCCCAAAAGCCAGCTTCTTCTTCAATCTAACCCTGTTCATCAGAAAGTTCCAGTTTTCTTTCATAAGGACAAACCCATTTGCGAGTCTTTGGTCATTGTGCAGTATGTTGATGAGGTCTGGTCCTCTGCCTCTCCCATTCTCCCTTCTGATCCTTATGAACGCGCCATTGCTCGTTTCTGGGCTGCCTTTATTGATGAGAAGGAACTTGACCCTAACCGCGACCTGCCGGTAGAACCAAAGTTATCAAAGATAAAAGGGGAACTTGACCCTAACCGCGACCTGCCGGTAGAACCAAAGTTATCAAGTTTAGTTCTTAACCCAAGAACAAATGGGAAGCTCTCACAATATGAGAAAACTCAATATCATTCAGATTCAAAAACTGATTTATCTCCCCTTTCTGTTTCCATGACGAACAGTGAGCTGAAGCTTATTGGTAAATGGTCGAGTCCGTACGTGATTAGGGTGAAGATTGCCCTCAGAATCAAATCCCTTGAATATGAAAACCTTGAAGAGCACGAAACGTTCTCCCCCAAAAGCAACCTTCTTCTTCAATCCAACCCTGTTTATGCCAAATCCATGCTCATAATTGAGTACATAGATGAAACTTGGTCTACTGGCCCTTCTATTCTCCCCTCCGATGCTTATGATCGAGCAGTTGCTAGGTTCTGGGTTGCTTACATACACGATAAGTGGTTTCCTACGATAGAAACCATTGTAACCGTTGATGAGGAAGAAAGGAAGCCATACTATGATATATTGGATGTAGTGCTTGAAAATATGGAGGATGCTTTCGTCAAATGCTGTAAAGAAAAGGCCTTTTTCGGTGGAGATAAAATTGGGTACCTTGATATTGCTTTTGGGAGCTTCCTGGGGTGGCTCAATGCCATAGAACAAGAGTATGAAAGGAAAGTTCCAGCTTTGGTTAAATGCGTTGAAAGGTTTGTTGCTGACCCTGCTGTCAAGGGGATTATACCTGAGACTGATAGAGTCGTTAAGCTTTCTAGGGCTTTTCGGATCAAATGGAGAGCTGAACTTGGTAAGAAATATAGTTATGAGTGCAAGTGA 1203 0.4281 MLLRSWERVSDDVKLLGAWQSPVTLRARIALNIKSVEYEFIEESFEPKSQLLLQSNPVHQKVPVFFHKDKPICESLVIVQYVDEVWSSASPILPSDPYERAIARFWAAFIDEKELDPNRDLPVEPKLSKIKGELDPNRDLPVEPKLSSLVLNPRTNGKLSQYEKTQYHSDSKTDLSPLSVSMTNSELKLIGKWSSPYVIRVKIALRIKSLEYENLEEHETFSPKSNLLLQSNPVYAKSMLIIEYIDETWSTGPSILPSDAYDRAVARFWVAYIHDKWFPTIETIVTVDEEERKPYYDILDVVLENMEDAFVKCCKEKAFFGGDKIGYLDIAFGSFLGWLNAIEQEYERKVPALVKCVERFVADPAVKGIIPETDRVVKLSRAFRIKWRAELGKKYSYECK* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2716 400 Gene3D - 93 133 - -
Lja4g2716 400 Gene3D - 256 389 - -
Lja4g2716 400 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 259 389 IPR010987 -
Lja4g2716 400 SUPERFAMILY GST C-terminal domain-like 247 382 IPR036282 -
Lja4g2716 400 CDD GST_N_Tau 13 86 - -
Lja4g2716 400 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 186 380 IPR045073 -
Lja4g2716 400 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 117 IPR045073 -
Lja4g2716 400 SUPERFAMILY Thioredoxin-like 12 112 IPR036249 -
Lja4g2716 400 Gene3D Glutaredoxin 8 92 - -
Lja4g2716 400 Gene3D Glutaredoxin 180 255 - -
Lja4g2716 400 SFLD Glutathione Transferase (cytosolic) 14 113 IPR040079 -
Lja4g2716 400 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 11 90 IPR004045 -
Lja4g2716 400 Pfam Glutathione S-transferase, N-terminal domain 13 84 IPR004045 -
Lja4g2716 400 SUPERFAMILY Thioredoxin-like 185 251 IPR036249 -
Lja4g2716 400 PANTHER GLUTATHIONE S-TRANSFERASE U17 186 380 - -
Lja4g2716 400 PANTHER GLUTATHIONE S-TRANSFERASE U17 11 117 - -
Lja4g2716 400 CDD GST_C_Tau 260 383 IPR045074 GO:0004364|GO:0006749
Lja4g2716 400 Pfam Glutathione S-transferase, C-terminal domain 268 364 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2716 Lja-Chr4 41818356 41825212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2716 182 381 Glutathione S-transferase Gene Family AT1G10360 47.511 3.94e-60 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2716 K00799 - jcu:105649799 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2716 4 41818356 41825212 Lja4g2716 4 41818356 41825212 ECH