Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2689 ATGAAGAAATTGTGGAATATTTGGTTGATTCCTGCAATCATTCTTCTGATTCTGGTGCTTGCTCCTACTACTTCAATTGCACAGCAGCTAACGACAACTGAGAATAGAATTCTTTTCCAAGTACAGAAATTTCTTGAATATCCTCAAGGTCTTCAAGAATGGACAAATTTCTGCTTCCTCCCTCCCTCACCTTCCCTGAAGATAGTTTGCTCAAATGGTCATGTCACAGAGTTAACTATTATAGGAAACAAAACTTCCTTACTCTCAGGAAGCTTCTCAATTGATTCCTTCTTTACTGTGATCACAAAGCTTTCAAATTTGAAGGTGTTGTCATTGGTGTCCTTGGGTTTGTGGGGTCCTTTACCCGCAAAGATCAACCGCTTCTCCTCTCTGCAAGTGCTAAACATGAGCTCAAATTTCATTCACGGGGAAATCCCATCTTTGAAATTGAAAAATCTGACCAGTTTGGTTTTGGCTGATAATCTCTTCAATGGAAGTGTTCCACCAGATCTGGAAACCCTCACTTGTCTTGAAGAGCTCAACTTGGGTGGTAACAAACTAGGTTCTCATTTCCCATCCTTTCTGTTCTCTCTTCCTTCCCTTCACCAAATAAACTTGTCTTCAAACCACCTAAGTGGTAACCTATCTATGCCATGTGCTCCTGCATCTGCACTAACATTTGTAGATATCTCACACAACCTTCTGGTAGGAAAATTACCATCCTGTATTATTGCTTCAAAGGCCGAGGTGCTATACTCTGGGAACTGTTTGTTAAGTGTGAAACAAAAACAACGTCCACCTTCATATTGCAATAAAAAAGCAGCACCAGCTTTAGCAGTTAAGCCTCCTTCTTCCAATTCGAAGGAAAAGGAATCGGGTATTAAATTAGGCCTACTACTTGGTCTAATTGGAGGAGGAATTGTGCTTGTAGGAATTGCAGGACTACTACTACTGCTTCTACTCATCTTCAACAAGTCTAAAGCAAAAAGATCATATCATAACTCCCAAACGTTTGTTGCTCATAAATTTTCTCCAGCAGTACCAAATGTTAATGTTGCAAGACGTGTTCCACAGACAACGAGGCTAGCTGCAATTGGACTGCCACCATACCGTATTTTTACATCAGAGGAAATTGAAGATGCAACAAACAACTTTGATGCATCAAATCTTATAGAAGAAGGAACGCAGGGACAGCTATATAAAGGTTGGCTCAGAGATGGCTCAGTGGTCCTGGTTAATTGTGCAAAAATAAAGCACAGAGATTTGCCCTATAATAGCAGCATCATGCAGCACTTAGAGATATTACCCAATTTGAGACATAGGCATATGGTGAGTGTTGTTGGACACTCTGTCATTACTCATCAGGACCCTCCCCAATCCACCACCACTGTATTCATTGTATTTGAGTACATCTCAAATGTGTCACTCAGGGATCAACTTACAGATAGGAGAAAAAGAGAAATTCTGAAATGGCCCCAAAGAATGGCAATCAGCATAGGCATTGCAAGAGGAGTCCAGTTTTTGCACACAGAAATTACTCCTGCCATATTTGGCAATAATTTAAAGATTCACAACATTCTGTTGGATGATAGTCTCAATGCAAAACTTAGTGGATACAACATTCCCTTGCCATCCAAGGAAGATAATTTAGAAAGGTTCAATATGTTATGCAGCACACATAGTGCAGAAAAGGAAGATATTTATCTTCTGGGTGTAATTCTACTTGAAGTTATCACAGGCAGACAAATAGCAACCTCCAGTGAAGTACAAGAGCTCAAGGACGAGCTAGAGACAGGTTCATCAGACACAGCATCAATACTTCTAAGAAGTGCAATTGATCCTTCCCTGAGGGGAAGTTATGCATATGAATCAATGAGGACTGCAGTTCAGATTACCATCAACTGTCTCTCCAAGGTTCCTAGTAAGCGCCCTTCAATAGAGGATGTTCTCTGGAATTTACACTACTCAATGCAAGTTCAAGAGTCATGGACCAGTAGTGGAAACCTCAGCACAAAATTATAG 2022 0.4045 MKKLWNIWLIPAIILLILVLAPTTSIAQQLTTTENRILFQVQKFLEYPQGLQEWTNFCFLPPSPSLKIVCSNGHVTELTIIGNKTSLLSGSFSIDSFFTVITKLSNLKVLSLVSLGLWGPLPAKINRFSSLQVLNMSSNFIHGEIPSLKLKNLTSLVLADNLFNGSVPPDLETLTCLEELNLGGNKLGSHFPSFLFSLPSLHQINLSSNHLSGNLSMPCAPASALTFVDISHNLLVGKLPSCIIASKAEVLYSGNCLLSVKQKQRPPSYCNKKAAPALAVKPPSSNSKEKESGIKLGLLLGLIGGGIVLVGIAGLLLLLLLIFNKSKAKRSYHNSQTFVAHKFSPAVPNVNVARRVPQTTRLAAIGLPPYRIFTSEEIEDATNNFDASNLIEEGTQGQLYKGWLRDGSVVLVNCAKIKHRDLPYNSSIMQHLEILPNLRHRHMVSVVGHSVITHQDPPQSTTTVFIVFEYISNVSLRDQLTDRRKREILKWPQRMAISIGIARGVQFLHTEITPAIFGNNLKIHNILLDDSLNAKLSGYNIPLPSKEDNLERFNMLCSTHSAEKEDIYLLGVILLEVITGRQIATSSEVQELKDELETGSSDTASILLRSAIDPSLRGSYAYESMRTAVQITINCLSKVPSKRPSIEDVLWNLHYSMQVQESWTSSGNLSTKL* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2689 673 ProSiteProfiles Protein kinase domain profile. 385 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2689 673 PANTHER OS07G0166700 PROTEIN 8 193 IPR045272 GO:0004714|GO:0006468
Lja4g2689 673 Gene3D Phosphorylase Kinase; domain 1 358 470 - -
Lja4g2689 673 Gene3D Ribonuclease Inhibitor 149 267 IPR032675 -
Lja4g2689 673 PANTHER OS07G0166700 PROTEIN 194 666 IPR045272 GO:0004714|GO:0006468
Lja4g2689 673 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 194 666 - -
Lja4g2689 673 Gene3D Transferase(Phosphotransferase) domain 1 471 668 - -
Lja4g2689 673 SUPERFAMILY L domain-like 65 445 - -
Lja4g2689 673 SUPERFAMILY Protein kinase-like (PK-like) 365 653 IPR011009 -
Lja4g2689 673 Pfam Protein kinase domain 390 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2689 673 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 8 193 - -
Lja4g2689 673 Gene3D Ribonuclease Inhibitor 33 148 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2689 Lja-Chr4 37657061 37659915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2689 29 593 Miscellaneous Gene Families AT2G02780 45.768 1.71e-154 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lja4g2689 Pkinase 6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2689 - - lja:Lj0g3v0334209.1 1033.09