Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2672 ATGGCTGCTTCATCTGGGAGGCCTGAGCAGGATACCAGCAACAACACACATCCCAGGCTGGATGTCTTTGTGTGGGACATGGATGAGACCCTAGTACTCCTCAACTCCTTGCTGAAATCATCCTATGCCGAGGCTTTCAACGGTCTGAAGGATGTCCAGAAGGGCGTCGAGCTCGGGAGGATGTGGGAAAATCTCATTCTACAATTATGTGATGATTATTTCTTCTATGAACAAATTGAAGATTACAATAAGCCGTTTCTTGATGCTCTGACCCAATTTGACGACGGGAGGGATCTGTCGGATTATGACTTCAACCAAGATGAATTAGGTGCCCCAAATGATGATGACAACAAAAGAAAACTTGCTTATAGGCATCGAATTATAGCCCAAAAATATGTACAGGGTTTGCATAATATTTTAGATCACGAGGCAATAAAATTCTGGAATGAATTATATGATAAAACTGATGAATATACTGACAAATGGCTTTCATCAGCACGGGCCTTCTTGAAGGAGTGTTCAGGTGAAAATAACGATGCAGTTTCTTCTCTTGCTTTTGTTAACACAAGCAATGATTCCAATAATGCAAACCCTCAACATATAAATGTTTTAGTGACATCTGGATCGTTGATACCCTCTCTTGTAAAATGCTTGCTCTTTCACCTGGACAGCTTAATACCACATGCAAATGTTTATAGCTCATGGGAAGTGGGAAAAGTTCAATGTTTCCGATGGATCAAGGAGCGTTTCAACCACCCCAATGTTCGCTTTTGTGCAATTGGAGATGGATGGGAAGAGTGTGAAGCGGCTAAAACCATGAGATGGCCTTATGTTAAGATTGACCCAAGGCCAGATAAACTTCACAGGTTCCCTGGTCTCACACTGAGAACAGTTAGCAGTTATTTTTCTGTGGTGTACGGAGGACCTAACAATGAGAATGATGAAGAATGA 951 0.4185 MAASSGRPEQDTSNNTHPRLDVFVWDMDETLVLLNSLLKSSYAEAFNGLKDVQKGVELGRMWENLILQLCDDYFFYEQIEDYNKPFLDALTQFDDGRDLSDYDFNQDELGAPNDDDNKRKLAYRHRIIAQKYVQGLHNILDHEAIKFWNELYDKTDEYTDKWLSSARAFLKECSGENNDAVSSLAFVNTSNDSNNANPQHINVLVTSGSLIPSLVKCLLFHLDSLIPHANVYSSWEVGKVQCFRWIKERFNHPNVRFCAIGDGWEECEAAKTMRWPYVKIDPRPDKLHRFPGLTLRTVSSYFSVVYGGPNNENDEE* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2672 316 PANTHER EYES ABSENT 7 307 IPR028472 GO:0004725
Lja4g2672 316 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 7 307 - -
Lja4g2672 316 TIGRFAM EYA-cons_domain: EYA conserved domain 21 298 IPR006545 GO:0007275
Lja4g2672 316 Gene3D - 21 291 IPR038102 -
Lja4g2672 316 SUPERFAMILY HAD-like 22 282 IPR036412 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2672 20 316 Protein tyrosine phosphatase (PTP) family AT2G35320 60.201 8.36e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2672 - K17620 gmx:100799315 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2672 4 36639955 36644800 Lja4g2672 4 36639955 36644800 ECH