Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2666 ATGGGTAGTGGACTCTCCAACCTGTGTTCCTGCTTTGAACCGGTGAACCGGGAAAACGGACCGGACCACCACCACGTCGTTGATTTCACGGCCACCGAGCCATTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATCCTCCGCTCGCTTCATCTCTCCGACCCACTCCGATCGCTTCCTCTCACCTTCCACCTCGCTCCGGTTTTCCCCTTCCCATGACCACCGAGCAACCCGACCCGAATTTCACGAGACCGGGTTCAAATCCATTTCCGGCGCCGCCGTTAGTGCTAACAGCTCTGTTCCCAAGACGGTTATTCAGCTAGAAGAGGACGCCGCCGCGGCGGATACTGTTGCCACCAAGGGTAGTATTGTCAATGGGTTCGAGAGCACGTCGTTGTTCAGCGCTCTCCCGCTTCAGCCCGTGCCGCGAGGGGGGGAGCTTCTCGAGGGCGGTGGCGGGTTCTTCCTCTCCGGGCCAATTGAGAGTGGGGCGCACTCTGGACCGATTCACGGCGGTGCCGGAGGCGACAGCAGCGGTATCTCCGGCGGCGGGGATATTCCATTTTCTGCGCCGCTTGGGGGGATGTACGCGAGGAAGAAGAAGCTGAAGGGTGTGTCGGGGTTCCGGAAGGCGTTTCAACGGAAGGTGCCGGATAAGAAGCGGCCGTGGGTGGTGCCGGTGCTGAACTTCGTTGGGAGGAAGGAGGTTGCGGTGACCGAGGAGAAGCATCCGGCGGCGGTGGAGGCGAGGAGCGAGAGCAATAGCAACGTACAGTGGGCGCTTGGGAAGGCCGGGGAGGATCGGGTTCATGTGGTGGTGTCGGAGGAGCAGGGGTGGTTGTTCGTAGGGATATACGACGGTTTCAACGGCCCCGACGCGCCGGAGTTTCTGATGGGTCATCTCTACCGCGCCGTTCACAACGAGCTTCAGGGTTTGTTCTGGGAAGTCGAAGAAGAAGCAGCTCAGGAGAGCAACCTTGCAGGGCAGAGCGTAGCTGAGGTGAAGAGCAAGGAGGGAGAAGGTGAAGATTCGGGTTCTGCTTCGGCGAAGATGGTAGTGCAGGGAGCTGTAACGGGAACCGAGAGTAGACGGCGTAGATTGTGGGAGCTTCTCGCTGAAGACCCCGAAGATGGACTCGATCTTTCTGGGTCTGACAGGTTTGCGTTTTCTGTTGACGATGCAGTCAGCGTTAGCAATGCCAATGCGGGTTCTGCAGTTAGCAGACGGTGGCTGTTGTTGTCAAAACTGAAACATGGGTTGACAAAGCACAAGGAGGGTCATGGTAAGAAGTTGTTACCGTGGAATTTGGGGACGGAGGAGAAAGAGAAGGTGGAGGTGGAGAGTAATAGGGTGGAAGACCAGCCTAGTGGTGGCGGTGGTGGTGGGAAGAGGCGGAAAGTAGGTCCCGTGGATCATGATCTGGTTTTGAGTGCGCTGTCTCGGGCATTAGAAGTAACGGAGCTTGCATATTTGGATATGACGGATAAGCTTCTCGACACAAATCCGGAACTTGCTTTGATGGGTTCTTGTCTATTGGTTGCTGTTATGAGGGATGAGGATGTCTATGTGATGAATGTTGGGGATAGCCGTGCTATTGTTGCACACTACGAGCCCAAGGAGGTTGCTTCTAATGTGGTGGAATCTGGGAACAAGGGAGATACCGGTTCCAGCACTGAGAGCATTGTTGAGGAGCCCGTAGCTGAAAGTGCAATCAAGTTGGGGAATCAGCGTCGTGCTCAAGAAACGAGGTTGGTTGCATTGCAACTGTCTACTGATCACAGCACCAGCATTGAAGAAGAAATCATTAGAATTAAGAATGAGCATCCTGATGATAACCAATGTATAGTCAATGATAGAGTTAAAGGCCGTCTTAAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGTGGAATGAGGCAGTTCTAGAAATGTTTCGTAATCACTATATTGGCACTGCTCCATATATATCCTGCTGTCCTTCGCTGCGTCACCATAAGTTATGCCCAGAAGATCAGTTCCTGATCCTCTCATCTGATGGTTTATATCAATATCTAAACAACGAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTCCCAGAAGGAGACCCTGCCCAACATTTGATAGAAGAACTGCTCCTCCGTGCCGCCAAGAAGGCTGGAATGGACTTTCATGAATTGCTGGATATCCCACAAGGAGATCGGAGGAAGTATCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGGAGAATCTGGAAATCTTCAGGAAAATATCTATAA 2307 0.5288 MGSGLSNLCSCFEPVNRENGPDHHHVVDFTATEPLDETLGHSFCYVRSSARFISPTHSDRFLSPSTSLRFSPSHDHRATRPEFHETGFKSISGAAVSANSSVPKTVIQLEEDAAAADTVATKGSIVNGFESTSLFSALPLQPVPRGGELLEGGGGFFLSGPIESGAHSGPIHGGAGGDSSGISGGGDIPFSAPLGGMYARKKKLKGVSGFRKAFQRKVPDKKRPWVVPVLNFVGRKEVAVTEEKHPAAVEARSESNSNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHNELQGLFWEVEEEAAQESNLAGQSVAEVKSKEGEGEDSGSASAKMVVQGAVTGTESRRRRLWELLAEDPEDGLDLSGSDRFAFSVDDAVSVSNANAGSAVSRRWLLLSKLKHGLTKHKEGHGKKLLPWNLGTEEKEKVEVESNRVEDQPSGGGGGGKRRKVGPVDHDLVLSALSRALEVTELAYLDMTDKLLDTNPELALMGSCLLVAVMRDEDVYVMNVGDSRAIVAHYEPKEVASNVVESGNKGDTGSSTESIVEEPVAESAIKLGNQRRAQETRLVALQLSTDHSTSIEEEIIRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQPKWNEAVLEMFRNHYIGTAPYISCCPSLRHHKLCPEDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2666 768 MobiDBLite consensus disorder prediction 445 469 - -
Lja4g2666 768 CDD PP2Cc 473 756 IPR001932 -
Lja4g2666 768 PANTHER PROTEIN PHOSPHATASE 2C 29 20 766 - -
Lja4g2666 768 SUPERFAMILY PP2C-like 264 757 IPR036457 -
Lja4g2666 768 Gene3D - 233 763 IPR036457 -
Lja4g2666 768 MobiDBLite consensus disorder prediction 327 358 - -
Lja4g2666 768 ProSiteProfiles PPM-type phosphatase domain profile. 250 756 IPR001932 -
Lja4g2666 768 PANTHER PROTEIN PHOSPHATASE 2C 20 766 IPR015655 GO:0004722|GO:0006470
Lja4g2666 768 SMART PP2C_4 252 754 IPR001932 -
Lja4g2666 768 Pfam Protein phosphatase 2C 589 724 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2666 Lja-Chr4 36474129 36480494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2666 1 768 PP2C-type Phosphatase Gene Family AT2G35350 56.281 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2666 - - mtr:MTR_4g098650 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2666 4 36474129 36480494 Lja4g2666 4 36474129 36480494 ECH