Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2662 ATGGGTTGCTTACACTCCAAAACCGCTCATCTTCACTCCCCTGAAGACCCTCCAACCGCATTACCTGACTCTAAGAAACCCGATCCAGGTAGTGGTGGGGATGATGTTGATCAAGAGTTTCAGGTTCCGACATTCAAAGAGTACGGTCTGAGTGAGCTTCGAAGGGCCACGAATGAGTTCAGCACTGATTACATTGTCTCTGAGAGTGGTGAGAAAGCTCCTAATGTGGTCTACAGAGGGAAGCTTGAGAACAATCGTTTAGTTGCTGTCAAACGGTTCTCCAAACTGTCCTGGCCTGATTCCCAACAGTTTATGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTTGTGAATCTAATTGGTTGTTGTGCTGAAGGAGATGAAAGGCTCTTGGTAGCTGAGTACATGCCTAATGATACTTTGTCCAAGCATCTCTTTCATTGGGACAAGCAGCCATTACCATGGGACATGCGTGTTAGAGTTGCGTACCATGTTGCCCAGGCGCTTGATCACTGTAGCATGGAAAACCGGAAAATATATCATGATCTGAATGCATATAGAATTCTTTTTGATGAGGATGGTGATCCCCGTTTATCTAGTTTTGGGCTTATGAAAAACAGTCGAGATGGGAAAAGCTACAGTACTAATTTAGCTTATACTCCACCTGAGTTTTTGCGAACAGGCAGGATAATTGCAGAGAGTGTGATCTACAGCTATGGAACTGTTCTTCTAGATCTTTTGAGCGGCAAGCACATTCCTCCAAGTCATGCTTTGGACCTAATTAGAGGGAAAAATGCGTTGTTGTTGATGGACTCATCCCTAGAAGGGCAATATGCAAATGACGATGCTACGAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCCAGAGAACGACCTGATATTAAATTTCTTCTTACTGCAGTTGCACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGCTAATGGGCCTTACTAAAAATACAGCACCAGTGCTACCAACCATGCTTTCTCCTCTTGGAAAGGCGTGTGCAAGGATGGATCTTACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCATTCCAAGAGTGGACCCAACAAGTGCAAGACATCTTGAACACCAAGAAGTTTGGGGATATTGCATTTAGAGATAAGGATTTCAAAAATGCAATTGAGTATTATTCTAAGTTGGTGGTTATGATGTCTGTTCCTTCTGCCACTGTCTTTGCAAGGAGAGCCTTCTCCTACTTGATGAACGATCAGGCAGAGCTTGCGTTAAGAGATGCCATGCAGGCACAGGTATGCATACCTGATTGGCCAACTGCATTCTACTTGCAGGCTCTCGCGCTTTCAAAGCTGGGAATGGAAACTGATGCACAGGACATGCTTAATGATGGAGCTGCCTTTGAAGCTAAGAGGTCTAACAGCTGGCGTGGTTAA 1494 0.4431 MGCLHSKTAHLHSPEDPPTALPDSKKPDPGSGGDDVDQEFQVPTFKEYGLSELRRATNEFSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDSQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWDMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIAESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLTAVAPLQKQKEVASHVLMGLTKNTAPVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLNDGAAFEAKRSNSWRG* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2662 497 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 496 - -
Lja4g2662 497 MobiDBLite consensus disorder prediction 1 38 - -
Lja4g2662 497 Gene3D Transferase(Phosphotransferase) domain 1 140 332 - -
Lja4g2662 497 SUPERFAMILY Protein kinase-like (PK-like) 46 314 IPR011009 -
Lja4g2662 497 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 496 IPR045845 GO:0004672|GO:0009742
Lja4g2662 497 Gene3D Phosphorylase Kinase; domain 1 35 138 - -
Lja4g2662 497 ProSiteProfiles Protein kinase domain profile. 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2662 497 SUPERFAMILY TPR-like 388 486 IPR011990 GO:0005515
Lja4g2662 497 Gene3D Tetratricopeptide repeat domain 387 496 IPR011990 GO:0005515
Lja4g2662 497 Pfam Protein tyrosine and serine/threonine kinase 76 311 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2662 Lja-Chr4 36301456 36307386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2662 14 317 Glycoside Hydrolase AT3G07070 33.945 1.97e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lja4g2662 PK_Tyr_Ser-Thr 7.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2662 K14500 - gmx:100793576 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2662 4 36301456 36307386 Lja4g2662 4 36301456 36307386 ECH