Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2636 ATGAAGTGTTTCTTCTTCAAAGAGAAGTGCAAATCTGCTCCAGAGTTGCAGAACCGGAGCAAGAAGAAGAACCCTGCTGGGAACCGGGCTGCAAACTCCACTGGCTCTGTATCATCTGTGAAGAGTGTGACTGACTTGTACAGAGAGAAAGAGCATAATTTCAGGGTGTTTGATTGGAAGGAGCTAAGAGATGCCACAAATGGTTTCAATAGAATGTTGAAGATCGGAGAAGGGGGTTTTGGGAGTGTGTATAAAGGATCTATCAAGCCTCCAGATGGAGAAAGTGGTGATCCAATTGTAGTTGCCATCAAAAGGCTTAACACACAAGGCTTCCAGGGTCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCATTGTGAATCACCCAAATTTGGTAAAGCTTTTGGGATTCTGCTCTGTAGATGGAGAAAGAGGGATCCAAAGGCTGTTGGTGTATGAGTACATGCCCAACAGGAGCTTGGAACACCACCTTTTCAATAAAACTTTGCCTACCATGCCTTGGAAAACAAGATTGGAGATCATGCTTGGTGCTGCTCAAGGATTAGCTTATCTACATGAGGAATTGGAGATTCAGGTGATCTACAGAGATTTTAAATGTTCAAACGTTCTATTGGATGCGGATTTCCACCCGAAGCTCTCAGACTTCGGTCTTGCTAGAGAAGGGCCACAAGGTGATCACACTCATGTATCTACTGCGGTAGTTGGGACACAAGGATACGCTGCGCCAGAGTATATTGAAACAGGTCATCTCAAAGTTCAGAGTGACATGTGGAGTTTTGGTGTTGTACTCTATGAGATCCTCACCGGAAGACGGTCATTGGAAAGAAACCGTCCAACCGCTGAGCAAAAGCTACTAGATTGGGTCAAACTGTACCCTGCTGACAGCAGCAGATTCACCATGATCATGGATCCGCGTCTCAGGAACCAGTATTCTCTTGGCGCCGCCCGCAAAATAGCCAAGTTGGCAGATAGCTGCTTAAAGAAGAACCCTGAAGATAGACCACCCATGAGTCAGATTGTGGAAAGCTTGAAGCAAGCATTGCAATTTTCAGAAACATCAAACACTTCACAAGATATTGGCGAGTCCTCTCGGTCTAAATTGGTTAGAAAAGGTAAATAG 1143 0.4479 MKCFFFKEKCKSAPELQNRSKKKNPAGNRAANSTGSVSSVKSVTDLYREKEHNFRVFDWKELRDATNGFNRMLKIGEGGFGSVYKGSIKPPDGESGDPIVVAIKRLNTQGFQGHKEWLAEVQFLSIVNHPNLVKLLGFCSVDGERGIQRLLVYEYMPNRSLEHHLFNKTLPTMPWKTRLEIMLGAAQGLAYLHEELEIQVIYRDFKCSNVLLDADFHPKLSDFGLAREGPQGDHTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTAEQKLLDWVKLYPADSSRFTMIMDPRLRNQYSLGAARKIAKLADSCLKKNPEDRPPMSQIVESLKQALQFSETSNTSQDIGESSRSKLVRKGK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2636 380 PANTHER RECEPTOR-LIKE KINASE PLANT 11 361 - -
Lja4g2636 380 MobiDBLite consensus disorder prediction 357 380 - -
Lja4g2636 380 PANTHER OS01G0588500 PROTEIN-RELATED 11 361 - -
Lja4g2636 380 MobiDBLite consensus disorder prediction 19 36 - -
Lja4g2636 380 CDD STKc_IRAK 75 353 - -
Lja4g2636 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Lja4g2636 380 ProSitePatterns Protein kinases ATP-binding region signature. 75 104 IPR017441 GO:0005524
Lja4g2636 380 MobiDBLite consensus disorder prediction 15 36 - -
Lja4g2636 380 Pfam Protein tyrosine and serine/threonine kinase 74 351 IPR001245 GO:0004672|GO:0006468
Lja4g2636 380 Gene3D Phosphorylase Kinase; domain 1 40 155 - -
Lja4g2636 380 ProSiteProfiles Protein kinase domain profile. 69 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2636 380 Gene3D Transferase(Phosphotransferase) domain 1 156 375 - -
Lja4g2636 380 SUPERFAMILY Protein kinase-like (PK-like) 51 351 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2636 Lja-Chr4 35181503 35185386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2636 3 351 Glycoside Hydrolase AT3G07070 43.296 1.09e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lja4g2636 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2636 - K00924 gmx:100786966 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0160 2 1311288 1314420 Lja4g2636 4 35181503 35185386 PCT