Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2625 ATGGAGGAACGGTATGAGCCATTAAAGGAACTTGGTTCTGGGAATTTTGGAGTGGCTAGGTTGGCAAGAGATAAGAACACTGGAGAGCTTGTTGCTGTCAAATACATAGAGAGGGGGAAAAAGATTGATGAGAATGTTCAGAGGGAGATAATTAACCACCGGTCTTTAAGGCATCCAAATATTATCAGGTTCAAAGAGGTTTTACTGACCCCTACTCATTTAGCCATTGTCTTGGAGTATGCTTCTGGCGGTGAACTATTTGAGAGGATATGCAGTGCAGGTCGATTTAGTGAAGATGAGGCAAGATATTTCTTCCAGCAGTTAATATCTGGGGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTGAAATTGGAAAACACTCTCTTGGATGGAAATCCATCCCCTCGCCTTAAAATCTGCGACTTCGGTTACTCCAAGTCTGCTATACTGCACTCTCAACCTAAGTCAACAGTTGGAACTCCTGCATACATTGCTCCCGAGGTTCTGTCACGAAAGGAGTATGACGGAAAGGTTGCAGATGTTTGGTCCTGTGGAGTGACTCTTTATGTCATGTTAGTTGGTGCATACCCATTTGAAGATCCAGATGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATAGGTGTTCAGTACTCCATACCCGACTATGTACGCGTTTCTGCAGAGTGTAGAAATCTTCTTTCTCGAATCTTTGTTGCTGATCCTGCCAAGAGGATCACCATAGCAGAGATAAAACAGAATCCTTGGTTTTTGAAGAGTTTGCCTAAAGAAATCATTGAAGCTGAAACAAAAGGTTTCGTGGAAACAAAGAAGGACCAACTAAGCCAGAGTGTTGAAGAAATCATGAGGATTGTTCAAGAGGCAAGGACACCAGGACAAGGAGGATCTAAAGCTATTGATGGTGGACAAGTTGGCACTGGCTCTATGGATGTTGAAGATGATGAGGAAATTGATGTTAGTGGTGACTATGAACAAGTGTGA 1014 0.4211 MEERYEPLKELGSGNFGVARLARDKNTGELVAVKYIERGKKIDENVQREIINHRSLRHPNIIRFKEVLLTPTHLAIVLEYASGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGNPSPRLKICDFGYSKSAILHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTIGRIIGVQYSIPDYVRVSAECRNLLSRIFVADPAKRITIAEIKQNPWFLKSLPKEIIEAETKGFVETKKDQLSQSVEEIMRIVQEARTPGQGGSKAIDGGQVGTGSMDVEDDEEIDVSGDYEQV* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2625 337 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2625 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Lja4g2625 337 MobiDBLite consensus disorder prediction 320 337 - -
Lja4g2625 337 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2625 337 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
Lja4g2625 337 CDD STKc_SnRK2 4 260 - -
Lja4g2625 337 PANTHER SERINE/THREONINE KINASE 3 330 - -
Lja4g2625 337 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2625 337 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Lja4g2625 337 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 330 - -
Lja4g2625 337 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Lja4g2625 337 SUPERFAMILY Protein kinase-like (PK-like) 3 269 IPR011009 -
Lja4g2625 337 MobiDBLite consensus disorder prediction 300 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2625 Lja-Chr4 34909199 34913832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2625 4 273 CBL-interacting serine-threonine protein kinases AT4G24400 45.000 5.81e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lja4g2625 Pkinase 1.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2625 K14498 - gmx:100817713 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0155 2 1265391 1267282 Lja4g2625 4 34909199 34913832 PCT