Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2603 ATGAAGATTGCAAAAGGTGCAGCAGAAGGACTTGAATATCTACATGAAGAAGCTGATACTCCAGTGATATATCGCGATTTCAAGTCATCAAACATACTGCTAGATGAAAATTTCAATCCAAAGCTCTCTGATTTTGGACTTGCAAAGTTTGGTCCAACAGGTGATAAAACACATGTATCCACAAGGGTGATGGGAACTTATGGCTACTGTGCTCCTGAATATGCCTCAACAGGTCAATTGACATCAAAATCTGATGTATACAGCTTTGGAGTAGTGCTTTTAGAGATGATCACCGGAAGAAGAGTGTTTGATCATTCAAGACCATGTGAAGAGCAAAACTTAGTCGCTTGGGCACAACCACTATTCAGAGACAGAAGGAAACATGCATCAATAGCTGATCCATTGCTAGAAGGGAAGTACCCAAAAAAGGGTCTATCCCAAGCACTAGCAGTTGTTGCAATGTGTCTTCGAGAGGAAGCTGAAGCTAGACCTGTGATAAGTGATGTAGTTACAGCTCTTGGCAATTTATCAAAGAAGCACGTGTAA 546 0.4103 MKIAKGAAEGLEYLHEEADTPVIYRDFKSSNILLDENFNPKLSDFGLAKFGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTSKSDVYSFGVVLLEMITGRRVFDHSRPCEEQNLVAWAQPLFRDRRKHASIADPLLEGKYPKKGLSQALAVVAMCLREEAEARPVISDVVTALGNLSKKHV* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2603 181 PANTHER OS07G0668900 PROTEIN 1 179 - -
Lja4g2603 181 PANTHER OS07G0668900 PROTEIN 1 179 - -
Lja4g2603 181 Gene3D Transferase(Phosphotransferase) domain 1 1 181 - -
Lja4g2603 181 Pfam Protein kinase domain 2 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2603 181 SUPERFAMILY Protein kinase-like (PK-like) 2 173 IPR011009 -
Lja4g2603 181 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g2603 181 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2603 Lja-Chr4 34199205 34201970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2603 1 176 Glycoside Hydrolase AT3G07070 70.455 6.51e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lja4g2603 Pkinase 3.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2603 - - gmx:100797557 302.753