Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2572 ATGGCAGGCCGATTTCTAAGCATTTTGCTTTTGATGATACCTATGTTGCTTCTTAGCTCATCTCAAGCAACAGCAAGGGAATTTCATGTTGGTGGCAAAGATGGGTGGGTGCTGAAACCTTCTGAAGATTTCAATCACTGGGCTCAAAGAAACAGATTTCAAGTCAATGATACTATGTGGATTGATTGCGTTCTAGTTGTGAACAAAGAAGACTATGATTCATGCAACACAAACAAACCCATAAAAAAGATGGATGATGGGAATTCAACTTTTAATCTTGAGAAATCAGGTCTTTATTTCTTCATCAGTGGAAACAGTGACCACTGCAAAAATGGTCAAAAGCTCATAGTCCTAGTCATGGCTATGAAGCATACTACTCATGCACCACCATCTAAGGCACCGAAAATTTACTCATCCAATATGAACACTTCGGCACCGGCACTAGCCGAGGCTTCGGGTTCAACAAGGTTGGGCGGTTCCGTGGGTATGGGTTTAGATGTGTGGATTGGAGTTGGAGTTGTTTTGAGCGTCATCAACTTTATATGA 546 0.4158 MAGRFLSILLLMIPMLLLSSSQATAREFHVGGKDGWVLKPSEDFNHWAQRNRFQVNDTMWIDCVLVVNKEDYDSCNTNKPIKKMDDGNSTFNLEKSGLYFFISGNSDHCKNGQKLIVLVMAMKHTTHAPPSKAPKIYSSNMNTSAPALAEASGSTRLGGSVGMGLDVWIGVGVVLSVINFI* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2572 181 Gene3D - 24 125 IPR008972 -
Lja4g2572 181 PANTHER EARLY NODULIN-LIKE PROTEIN 2 10 137 - -
Lja4g2572 181 SUPERFAMILY Cupredoxins 25 120 IPR008972 -
Lja4g2572 181 CDD OsENODL1_like 26 120 IPR041846 -
Lja4g2572 181 Pfam Plastocyanin-like domain 36 113 IPR003245 GO:0009055
Lja4g2572 181 ProSiteProfiles Phytocyanin domain profile. 26 121 IPR003245 GO:0009055
Lja4g2572 181 PANTHER BLUE COPPER PROTEIN 10 137 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2572 Lja-Chr4 32933705 32935516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2572 9 169 Phytocyanin Superfamily AT4G28365 41.622 2.17e-41 136