Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2561 ATGGTGGTGGGTGTGGTGAATGGAAGAATGATGGAAGATATAGCAATAATTGGAGGGTTGATAGGGGTACAGGTTTTGTATGCAGGGAGTGCTATGCTTCTAGGTTATCTCATGTCTTTAGGCATCAAGTCTCTCACCATTGTCATTTTCACTTCCTTTGCTACATTCCTTCTTCTTCTTCCCTTTGCATTTTATTATGAAAGGAGCAAGTGGCCTAAGCAATTCAGCCTCAAGTTGCTTATACAGTTTATTGTCATTGCGCTTGCAAGTGTTGTGTTCCAGTCTTTATTCCTCAAAGGAATCAATCTAACCTCTCCAGCAATGGGAACTGCCATGCCAAACCTTGCCCCCGGCCTCATCTTCATCATCGCGTGGATTTTTAGGATGGAAAAAGTGGACTTAAGGTGCACATATAGCAGAGTGAAAATCATTGGCACATTGCTTTGTGTGGTGGGGGCTGTTGCAATGAGCATGATGCAGAGCCTCTCCACTTCTGTACCCATTAAAGAGGGAACAGTTACAGTTCAATTGGCATCTCCACCACCAGTTCTAACGTTTGACAGAGACAAGATTTTCGGTTGCATCTATCTCTTGGTTGCGATCATCATATTGTCAAGCAGCATTGTTCTGCAGGCTTTTACTCTTGGAGATTTTCCTGCTCCAATGTCCTTGTGTGTTATAACATCCTTTTTAGCGGGGTCACTGGCAGCAGTTGCTCAGCTCGTTGAAGATCATCAATTCAGTACTGGTTGGCCAATAGTGAGTGTTGGTGACATGGTTGGCTATGGTTTTCTGGTGCAGTGTCTGGAATATGCTTAA 819 0.4383 MVVGVVNGRMMEDIAIIGGLIGVQVLYAGSAMLLGYLMSLGIKSLTIVIFTSFATFLLLLPFAFYYERSKWPKQFSLKLLIQFIVIALASVVFQSLFLKGINLTSPAMGTAMPNLAPGLIFIIAWIFRMEKVDLRCTYSRVKIIGTLLCVVGAVAMSMMQSLSTSVPIKEGTVTVQLASPPPVLTFDRDKIFGCIYLLVAIIILSSSIVLQAFTLGDFPAPMSLCVITSFLAGSLAAVAQLVEDHQFSTGWPIVSVGDMVGYGFLVQCLEYA* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2561 272 PANTHER OS11G0588100 PROTEIN 13 263 - -
Lja4g2561 272 Pfam EamA-like transporter family 24 157 IPR000620 GO:0016020|GO:0016021
Lja4g2561 272 PANTHER WAT1-RELATED PROTEIN 13 263 IPR030184 GO:0016021|GO:0022857
Lja4g2561 272 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2561 Lja-Chr4 32728310 32732432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2561 9 265 Nodulin-like Gene Family AT5G47470 52.124 7.17e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2561 - - gmx:100809182 357.066