Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2523 ATGGCTAGTGCGTGGGTGAAATCGCTACACTGCAAGTCAAGAGCATTTGAAGACGTGTTCCACCCCAACCCAAAATTCTCAGCTAGTTGCAGAAAAAGTGTTCAAAGCATCAAAGACATGGTCGACATACCCAAGCCCAAGCCCAAGCCCAGGCCCAAACCCAAGCCCAGAAAATCAAAGCCTACATTGGAAAAACACCCAAGTTCAAAATACCCATCAACAACAATCACAAACCCCGATTTCCAAACAGAAACCCCCACCATAAACCGCTCACGCAGCACCACCACCACCACCGCCACCGCAACGACCTCTTCTTCCCGTGCCGTCACTGAGCTTCCCGAGGGGCATCCTTCCCGCAACGTGGTCGATATCATCTTTCACAGTAGTTGGGGCCCGAAGCAGTTCCCGGGTCGGGTCGAGATGGTGTTCAAGGTCCAGAATAGTGCGCGGACAGTTTCACGGTTTGACGAGTTTCGCGAGGCGGTGCAGGCGCGCGCGGCCGCTGAGCTCGACGGAGGGAACAATTTCGAGGAGAACGCGCGGTGTGTCGCTGACGGGAATGAAGTGATGCGGTTTCACTGTTTGGGTGCCTACGGCGGCGTTGATGGTGGATGTTCGTGGTCGTTTCCCGAGCGTAACGGGTCGGCGATCTGCACGTTTGCTGGTAGCGGCGACGCGCATGAGAGTACTGGCGGTGGAAGGGGGAGGAGGGCGATGCTGGTGTGTCGGGTCATAGCGGGTCGGGTCTCGAAGCAGATCGGGTTTCTGGACTCGCTGTTGGATAAGCGAGTCGGGTTTGACTCAGTGAGTGGTGACAACGGCGAGTTGTTTGTTTTTGACCCGCGTGCGGTATTGCCCTGTTTTCTTATTGTTTACAGGTTGTAA 885 0.5537 MASAWVKSLHCKSRAFEDVFHPNPKFSASCRKSVQSIKDMVDIPKPKPKPRPKPKPRKSKPTLEKHPSSKYPSTTITNPDFQTETPTINRSRSTTTTTATATTSSSRAVTELPEGHPSRNVVDIIFHSSWGPKQFPGRVEMVFKVQNSARTVSRFDEFREAVQARAAAELDGGNNFEENARCVADGNEVMRFHCLGAYGGVDGGCSWSFPERNGSAICTFAGSGDAHESTGGGRGRRAMLVCRVIAGRVSKQIGFLDSLLDKRVGFDSVSGDNGELFVFDPRAVLPCFLIVYRL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2523 294 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 293 - -
Lja4g2523 294 MobiDBLite consensus disorder prediction 66 111 - -
Lja4g2523 294 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 293 - -
Lja4g2523 294 MobiDBLite consensus disorder prediction 21 114 - -
Lja4g2523 294 SUPERFAMILY ADP-ribosylation 109 293 - -
Lja4g2523 294 Gene3D - 107 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2523 Lja-Chr4 31382781 31383807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2523 99 293 C2H2 Transcription Factor Family AT5G54630 34.914 2.51e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2523 - - gmx:100792099 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2523 4 31382781 31383807 Lja4g2523 4 31382781 31383807 ECH