Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2474 ATGTTTTCTCAAACTTCATTTCAAAACCTCAACATGAATAATTGGCACGACAATGAAACCACCACAAACCTGATCATAGCAACCTTGGCCATTTCAGCCATCACTTGGTGTGCATGGCTCTTCTTCCTCAAACCCAAGGCCCATAGCCGGCCACTACCACCAGGCCCACCGGGCCTCCCCATCTTAGGCAACCTTCTATCCCTCGACCCGGAACTTCACACTTACCTCGCCGGGTTAGCCCGGACCCACGGACCGGTTTTCAAGCTCCGACTCGGAAGCAAGCTGGCCATCGTGTTAACTTCGTCTTCCATGGCTCGTCAAGTTCTCAAGGACCAGGACACCATCTTCGCCAACCGTGACGTGACCGCCGCCGCCAGGGCAGGCTTCTACGGCGGCTCCGACATAATTTGGAGCCCGTACGGACCCGAATGGCGGATGCTGAGAAAAGTGTGCGTGCTCAAGATGCTCAACACCACCACCCTGGATTCCCTTCACCACATCCGTCGCAACGAAGTCCGGAAAACAATCGTGTACCTGCGGAATCGGGTCGGGTCTCCGGTGAAAGTGGGGGAGCATATGATTTCGACGGGGCTGAACGTCATGACGAACATGATGTGGGGCGGGGCGGTGGAAGGGGCGGAGATGGAAAATTGGGCGGCGGAGTTTAATGCGTTGGTGGCGGAGTTCGCGGAGCTTTTAGCGCAGCCGAACGTGTCGGACTTGTTTCCCGGGTTGGCCCGGTTTGATTTGCAGGGTGTGGAGAAGCGGATGAGAGTGTTGGTGTCGCGGTTGGATGGAGTGTTTGAGAAGATGATTGGTGAAAGGGTGAAGATGAAAGCGGAAAATCATCAGAGCAGTGATTTTCTGCAGTTTTTGTTGGATTTGAAGGAGGAGCGTGATCCCAAGATGCAACTCACCAATGATCATGTTAAGGGTCTTCTACTGGACATGATTATGGCTGGATCTGAAACATCCTCCACCACAATTGAGTTTACAATGGCGGAAATGATGAAAAAGCCAGAGGTAATGAAGAGAGTTCAAGAGGAACTGGAAGGTGTAGTTGGGAAAGATAACATGGTAGAAGAGTCACATATTCATAAGCTTCCCTACTTACAAGCTGTGATGAAAGAAACTCTTCGGTTGCACCCTGTAGCTCCACTCCTAGTACCTCATAGCCCTAGTGAAACCACCACTGTGGGAGGCTACACAATTCCAAAGGGTTCTCAAGTGTTTGTGAACGTGTGGGCTATTCAAAGGGACCCATCAAATTGGGAGAAACCATTAGAATTTGATCCTACAAGGTTTTTGGATGCCAAATGGGAGTACAGTGGGAGTGACTTCAATTATTTACCATTTGGTTCTGGAAGAAGAATTTGTGCAGGAATAACAATGGCAGAAAAGACAGTTTTGTGCTTCATAGCCACACTAGTGCACTTATTTGATTGGACAGTACCCCAAGGTGAAGAGTTGGATATTTCAGAAAAATTTAGTCTTGTTATCAGGATGAAAACACCTTTGGTTGCAATCCCCACCGCACGATTGTCCAATCCAGATCTTTATAAATAG 1566 0.4923 MFSQTSFQNLNMNNWHDNETTTNLIIATLAISAITWCAWLFFLKPKAHSRPLPPGPPGLPILGNLLSLDPELHTYLAGLARTHGPVFKLRLGSKLAIVLTSSSMARQVLKDQDTIFANRDVTAAARAGFYGGSDIIWSPYGPEWRMLRKVCVLKMLNTTTLDSLHHIRRNEVRKTIVYLRNRVGSPVKVGEHMISTGLNVMTNMMWGGAVEGAEMENWAAEFNALVAEFAELLAQPNVSDLFPGLARFDLQGVEKRMRVLVSRLDGVFEKMIGERVKMKAENHQSSDFLQFLLDLKEERDPKMQLTNDHVKGLLLDMIMAGSETSSTTIEFTMAEMMKKPEVMKRVQEELEGVVGKDNMVEESHIHKLPYLQAVMKETLRLHPVAPLLVPHSPSETTTVGGYTIPKGSQVFVNVWAIQRDPSNWEKPLEFDPTRFLDAKWEYSGSDFNYLPFGSGRRICAGITMAEKTVLCFIATLVHLFDWTVPQGEELDISEKFSLVIRMKTPLVAIPTARLSNPDLYK* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2474 521 Pfam Cytochrome P450 53 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 Gene3D Cytochrome P450 45 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PANTHER OS08G0547900 PROTEIN 12 521 - -
Lja4g2474 521 SUPERFAMILY Cytochrome P450 53 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 12 521 - -
Lja4g2474 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Lja4g2474 521 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2474 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2474 Lja-Chr4 29457767 29460195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2474 19 520 Cytochrome P450 AT4G12300 54.134 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2474 - - gmx:100787507 696.812