Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2473 ATGCTTGTAGGTGGAAGTGACACGTCCTCCAACACAATTGAGTTTGCAATGGCGGAAATGATTAACAAGCCAGAGGTAATGAAGAGGGTTGAAGACGAATTGGAAGGTGTAGTTGGGAAAGATAACATGGTTGAAGAGTCACATATTCATAAGCTTCCCTACTTGCTTGATGTGATGAAAGAAACTCTTCATGAAGCCACTTCTGCAGGAGGCTACACAATCCCAAAGGGTTCTCGGGTGTTTGTGAATGTGTGGGCTATTCATAGGGACCCTTCCATTTGGGAGAAACCACTAGTATTTGATCTTGAAAGGTTCTTGGATGCCAAATGGGATTTTAGTGGGAATGACTTTAGTTATTTCCCCTTTGGTTCTGGAAGAAGAATTTGTTTAGGAATACCAATGGCAGAGAGGTCTGTTTTGTACTTTCTAGCAACACTAGTGCACATGTTTGATTGGACAGTACCGAAAGGAGAAAAGTTAGATATATCAGAAAAGTTTGGTCTTACTCTCAAGAAGGAAACACCTCTGGTTGCCATCCCCATCCCACGACTTTCCAATCCTGATCTTTATCAATATAATTGA 582 0.4141 MLVGGSDTSSNTIEFAMAEMINKPEVMKRVEDELEGVVGKDNMVEESHIHKLPYLLDVMKETLHEATSAGGYTIPKGSRVFVNVWAIHRDPSIWEKPLVFDLERFLDAKWDFSGNDFSYFPFGSGRRICLGIPMAERSVLYFLATLVHMFDWTVPKGEKLDISEKFGLTLKKETPLVAIPIPRLSNPDLYQYN* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2473 193 Pfam Cytochrome P450 1 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2473 193 SUPERFAMILY Cytochrome P450 1 183 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2473 193 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2473 193 PRINTS E-class P450 group I signature 83 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2473 193 PRINTS E-class P450 group I signature 129 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2473 193 PRINTS E-class P450 group I signature 119 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2473 193 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 1 191 - -
Lja4g2473 193 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 122 131 IPR017972 GO:0005506|GO:0016705
Lja4g2473 193 Gene3D Cytochrome P450 1 178 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2473 193 PANTHER OS08G0547900 PROTEIN 1 191 - -
Lja4g2473 193 PRINTS P450 superfamily signature 129 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2473 193 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2473 193 PRINTS P450 superfamily signature 120 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2473 Lja-Chr4 29455005 29455628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2473 1 190 Cytochrome P450 AT4G12330 60.784 3.02e-87 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2473 - - lja:Lj0g3v0334369.1 351.673