Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2470 ATGATTCAGCTATCAACTTTCCTTCAAAACCTGAACTTGAAGGATTGGTACAGTGACACCACAAACCTGATCATAGCAACCTTAGCCATTTCAGCCATCACTTGGTACACATGGCTCTTCTTCCTCAAACCCAAAGCCCAGACCCCACCACTGCCACCAGGCCCACCGGGCCTCCCCATCTTCGGAAACCTTCTCTCCCTCGACCCGGAACTTCACACTTACTTCGCCGGGTTAGCCCGTACCCATGGCCCCATTTTCAAGCTCTGGCTTGGGAGCAAGCTTGGAATCGTCGTCACCTCACCTTCCATGGCGCGTCACGTGCTCAAGGACCACGACACCGTCTTCGCCAACCGTGATGTCCCCGCCGCCGGGAGAGCGGCAACCTACGGCGGCGCCGACATCGTGTGGAACCCGTACGGACCAGAGTGGCGGATGCTGAGGAAAGTTTGCGTGCTCAAGATGCTCAGCAACACCACGCTGGACTCCGTGTACGATCTCCGCCGCAACGAGGTTCGGAAGACGGTCGGGTACCTGCGGAGCCGGGCCGGGTCGCCGGTGAACGTGGGGGAGCAGGTATTTCTGACGGTGCTGAACGTGATTACGAACATGATGTGGGGAGGGTCGGTGGAAGGGGCGGAGAGGGAGACCTTGGGGGCGGAGTTCAGGGAGGCGGTGGCGGATATGACGGCTCTTCTCGGGAAACCGAACTTGTCGGATTTCTTTCCCGGGTTGGCCCGGTTTGATTTGCAAGGAGTGGAGAAACAGATGCATAAGGTGGTGCCGCGTTTTGATAGAATATTTGAGAAGATGATCGGTGAACGGGTGAAGATGGAGTCGGAGGGGAAGAGGAGTGAAAGCAAGGATTTTCTGCAGTTTTTGTTGAATTTGAAGGAAGAGGGTGATTCCAAGACCCCACTTTCCATCACCCATGTTAAGGCCCTTCTCATGGACATGCTTGCAGGTGGAAGTGACACATCCTCCAACACAGTTGAGTTTGCGATGGCGGAAATGATGCAGAAGCCAGAGGTAATGAAGAGAGTTCAAGAAGAATTAGAAGGTGTAGTTGGGAGAGATAACATGGTAGAAGAGTCTCATATTCATAAGCTTCCCTATTTGTTGGCTGTGATGAAGGAAACTCTTCGGTTGCACCCTGTGCTTCCACTTTTAGTTCCACACTGCCCAAGTGAAACCACTTCTGCAGGAGGCTACACGATCCCAAAGGGTTCTAGGGTGTTTGTGAATGTGTGGGCTATTCATAGGGACCCTTCCATTTGGGAGAACCCTCTAGAATTTGATCCTACAAGGTTTTTGGATGCTAAATGGGATTTTAGTGGGAATGACTTTAATTACTTTCCCTTTGGGTCTGGAAGAAGAATTTGTGCAGGAATTGCTATGGCAGAGAGGTCCGTTTTGTACTTTCTAGCAACACTAGTGCACTTGTTTGATTGGACAGTACCAGAAGGAGAAAAGTTAGATGTGTCTGAAAAATTTGGTATTGTTCTAAAAAAGGAAACACCTCTGGTTGCCATCCCCACCCCTCGACTTTCCAATCATGATCTTTATAAATAG 1569 0.5099 MIQLSTFLQNLNLKDWYSDTTNLIIATLAISAITWYTWLFFLKPKAQTPPLPPGPPGLPIFGNLLSLDPELHTYFAGLARTHGPIFKLWLGSKLGIVVTSPSMARHVLKDHDTVFANRDVPAAGRAATYGGADIVWNPYGPEWRMLRKVCVLKMLSNTTLDSVYDLRRNEVRKTVGYLRSRAGSPVNVGEQVFLTVLNVITNMMWGGSVEGAERETLGAEFREAVADMTALLGKPNLSDFFPGLARFDLQGVEKQMHKVVPRFDRIFEKMIGERVKMESEGKRSESKDFLQFLLNLKEEGDSKTPLSITHVKALLMDMLAGGSDTSSNTVEFAMAEMMQKPEVMKRVQEELEGVVGRDNMVEESHIHKLPYLLAVMKETLRLHPVLPLLVPHCPSETTSAGGYTIPKGSRVFVNVWAIHRDPSIWENPLEFDPTRFLDAKWDFSGNDFNYFPFGSGRRICAGIAMAERSVLYFLATLVHLFDWTVPEGEKLDVSEKFGIVLKKETPLVAIPTPRLSNHDLYK* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2470 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Lja4g2470 522 SUPERFAMILY Cytochrome P450 52 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 Pfam Cytochrome P450 52 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 Gene3D Cytochrome P450 41 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PANTHER OS08G0547900 PROTEIN 17 522 - -
Lja4g2470 522 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 17 522 - -
Lja4g2470 522 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g2470 522 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2470 Lja-Chr4 28968336 28970252 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2470 19 521 Cytochrome P450 AT4G12300 60.750 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2470 - - gmx:100787507 800.431