Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2467 ATGGATTATTTCCTTTTCATTGCTCTCACTTTCTTGTTGACCTTCCATGTTCACAATGCTCAAGGAAGTGAGCTTCCCACCACTACCACCGAGAGCACTGAGACAAGCAGTTCAAAAATATACATTATCCATGTGACGGGGCCAGAGGGTAAGATGTTAACTGAATCAGAAGATTTAGAGAGCTGGTACCATTCATTCTTGCCACCAACTCTTATGAGCTCTGAGGAACAGCCACGAGTGATTTACTCATACAAGAACGTGCTGCGTGGATTTGCTGCAAGTCTCACTCAAGAGGAGCTTAGTGCTGTGGAAAAGAAAAATGGCTTTATTTCAGCTCATCCTCAGAGGGTGCTACATCGTCAAACCACTCATACCCCGAAGTTCTTGGGGTTGCAGCAAGATACGGGAGTGTGGAAGGAATCCAATTTTGGAAAGGGAGTTATCATTGGGGTGCTGGACTCTGGAATCACCCCAGGTCATCCTTCATTCAGTGATGTAGGAATCCCACCACCACCACCGAAATGGAAAGGGAGATGTGATCTTAATGTGACAGCTTGTAACAACAAACTAATTGGAGCAAGGGCTTTCAATCTTGCAGCTGAGGCAATGAATGGAAAGAAAGCGGAGGCACCTATTGACGAGGATGGGCATGGGACTCACACAGCAAGCACAGCAGCCGGCGCTTTCGTGAACTACGCAGAAGTGCTAGGAAATGCCAAAGGCACAGCAGCAGGGATGGCCCCTCATGCTCACCTGGCAATTTACAAAGTATGCTTTGGAGAAGATTGCCCTGAGAGTGATATCCTAGCTGCATTAGATGCAGCAGTTGAAGATGGCGTGGATGTAATATCAATATCCCTCGGTCTAAGCGAGCCACCTCCATTTTTCAATGATAGCACTGCTATAGGAGCATTTGCTGCAATGCAGAAGGGAATCTTTGTGAGTTGTGCAGCAGGAAACTCTGGCCCTTTCAATAGCTCCATAGTTAATGCAGCCCCGTGGATTCTCACAGTTGGAGCAAGCACTATTGACAGAAGAATTGTAGCAACAGCAAAGCTTGGCAATGGGCAAGAATTTGATGGTGAATCTGTTTTCCAGCCTTCCAGTTTTACTCCAACATTGCTACCCCTAGCATATGCTGGAAAAAATGGTAAAGAAGAATCTGCATTCTGTGCTAATGGATCCTTGGATGACAGTGCTTTCAGAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGGGGTATAGCAAGAATAGCCAAAGGAGAGGAGGTGAAAAGAGCAGGTGGTGCCGCCATGATTCTGATGAATGATGAAACTAATGCCTTTAGTCTCTCAGCTGATGTACATGCTCTACCTGCAACACATGTAAGCTATGCTGCTGGAATAGAGATTAAGGCATATATAAATTCCACAGCAACACCAACAGCAACCATTTTATTTAAGGGAACTGTTATCGGAAACTCCCTAGCCCCTGCTGTTGCATCTTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCCGGTATTTTGAAACCAGATATCATAGGACCAGGCGTGAACATCCTAGCTGCCTGGCCGTTCCCTCTGAGTAACAGCACCGATTCAAAACTCACTTTCAACATTGAGTCTGGAACATCTATGTCATGCCCACATCTTAGTGGCATTGCTGCTTTGCTCAAAAGCTCTCATCCTCATTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACACAATAAATTTAGGAAACAAACTCATTGTTGATGAAACACTTCAGCCTACAGATCTCTTTGCCACAGGTTCTGGCCACGTGAATCCATCAAGAGCAAACGATCCTGGATTAGTTTATGATATCCAACCTGATGATTATATACCTTATCTGTGTGGTCTAGGCTATAGTGAGACTGAAGTTGGGATCATTGCACATAGAAAAATTAAGTGCTCTGCAAGCATTCCCGAAGGAGAGCTCAACTACCCCTCATTTTCTGTTGAGCTTGGTTCCTCAAAGACATTCACAAGGACTGTGACAAATGTCGGTGAGGCCCATTCATCTTATGATCTCATAGTTGCGGCACCACAAGGAGTTGATGTGAAGGTCCAGCCATATAAGCTTAACTTTTCTGAAGTGAACCAGAAAGAGACATATTCAGTTACATTCAGCCGCACAGGGTTGGGTAATAAGACACAGGAATATGCTCAAGGTTTTCTAAAATGGGTCTCTACCAAACACACTGTAAGGAGTCCTATCTCAGTCAAATTCATATAG 2268 0.4493 MDYFLFIALTFLLTFHVHNAQGSELPTTTTESTETSSSKIYIIHVTGPEGKMLTESEDLESWYHSFLPPTLMSSEEQPRVIYSYKNVLRGFAASLTQEELSAVEKKNGFISAHPQRVLHRQTTHTPKFLGLQQDTGVWKESNFGKGVIIGVLDSGITPGHPSFSDVGIPPPPPKWKGRCDLNVTACNNKLIGARAFNLAAEAMNGKKAEAPIDEDGHGTHTASTAAGAFVNYAEVLGNAKGTAAGMAPHAHLAIYKVCFGEDCPESDILAALDAAVEDGVDVISISLGLSEPPPFFNDSTAIGAFAAMQKGIFVSCAAGNSGPFNSSIVNAAPWILTVGASTIDRRIVATAKLGNGQEFDGESVFQPSSFTPTLLPLAYAGKNGKEESAFCANGSLDDSAFRGKVVLCERGGGIARIAKGEEVKRAGGAAMILMNDETNAFSLSADVHALPATHVSYAAGIEIKAYINSTATPTATILFKGTVIGNSLAPAVASFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLSNSTDSKLTFNIESGTSMSCPHLSGIAALLKSSHPHWSPAAIKSAIMTSADTINLGNKLIVDETLQPTDLFATGSGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSETEVGIIAHRKIKCSASIPEGELNYPSFSVELGSSKTFTRTVTNVGEAHSSYDLIVAAPQGVDVKVQPYKLNFSEVNQKETYSVTFSRTGLGNKTQEYAQGFLKWVSTKHTVRSPISVKFI* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2467 755 CDD Peptidases_S8_3 118 578 IPR034197 -
Lja4g2467 755 Gene3D Peptidase S8/S53 domain 146 624 IPR036852 GO:0004252|GO:0006508
Lja4g2467 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 120 IPR037045 -
Lja4g2467 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 752 IPR045051 -
Lja4g2467 755 Pfam Fibronectin type-III domain 656 752 IPR041469 -
Lja4g2467 755 Gene3D - 628 754 - -
Lja4g2467 755 ProSiteProfiles Serine proteases, subtilase domain profile. 128 611 - -
Lja4g2467 755 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 36 752 - -
Lja4g2467 755 CDD PA_subtilisin_like 350 477 - -
Lja4g2467 755 Gene3D - 344 485 - -
Lja4g2467 755 Pfam PA domain 377 461 IPR003137 -
Lja4g2467 755 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Lja4g2467 755 Pfam Subtilase family 144 581 IPR000209 GO:0006508|GO:0008236
Lja4g2467 755 SUPERFAMILY Subtilisin-like 121 615 IPR036852 GO:0004252|GO:0006508
Lja4g2467 755 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Lja4g2467 755 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Lja4g2467 755 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Lja4g2467 755 Pfam Peptidase inhibitor I9 41 116 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2467 Lja-Chr4 28829915 28832752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2467 30 752 Subtilisin-like Serine Gene Family AT1G04110 45.932 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2467 - - gmx:100785376 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2467 4 28829915 28832752 Lja4g2467 4 28829915 28832752 ECH
Lja4g2467 4 28829915 28832752 Lja4g2466 4 28822658 28825010 PCT