Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2466 ATGGATTATTTCCTTTTCATTACTCTGACTTTCTTTTTGAGCTTCCATGTTCATATTGCTCAAGGAAGTGAGCTTCCCACCACTACCATTGAGAGCACCGAGACAAGCAGTTCAAAAATATATATTATCCATGTGACAGAGCCAGAGGGTAGGATCAAGATGTTCACTGAAGCAGAAGATTTAGAGAGCTGGTACCATTCATTCTTGCCCCTAACTGTTAAGAGCTCTGAGGAACAGCCAAGAGTAATTTATTCATACAAGAACGTGCTGCGTGGTTTCGCTGCAAGACTCACTCAAGAGGAGCTGAAGGATGTGGAAAAGAAAAGTGGCTTTATTTCAGCTCATCCTGAGAGGGTGCTACGTCGTCAAACCACTCACACTTCAAAGTTCTTGGGGTTGCAGCAAGAAAATGGATTGTGGAAGGAATCAAACTTTGGAAAGGGAGTGATCATTGGGGTGCTGGACTCTGGAATAACACCTGGTCATCCTTCATTTAGTGATGCAGGAATGCCTCCACCACCACCAAAATGGAAAGGGAGATGTGAACTTAATGTGACAGCTTGTAACAACAAACTAATTGGAGCAAGGTCTTTCAACCTTGCAGCTAAGGCAACGAAAGGAGAGAAAGCAGAGGCACCGATTGATGAGGATGGACATGGGACTCACACAGCAAGCACAGCAGCTGGCGCTTTCGTGGACTATGCAGAAGTACTAGGAAATGCCAAAGGCACAGCAGCAGGGGTGGCCCCTCTTGCTCACCTGGCAATTTACAAAGTTTGCTTTGGAGAAGATTGCCCTGAAAGTGATGTGCTAGCTGGATTAGATGCAGCAGTGGAAGATGGCGTGGATGTAATATCAATATCCCTCGGTCGAAGCAAGGCACATCCATTTTTCGACGAAAGCACTGCTATAGGAGCATTTGCTGCAATTCAGAAGGGAATCTTTGTAAGTTGTGCAGCAGGAAACTTTGGCCCTTTCAGTAGCTCCTTAGTTAACGGAGCCCCATGGGTCCTCACAGTCGGAGCAAGCACTATTGACAGAAGAATTGTAGCGACAGTAAAGCTTGGCAACGGGCGAGAATTTGGTGGTGAATCTGTTTTCCAGCCTACCAGTTTTCCTCCAAAGTTGCTTCCCTTAGCATATGCTGGAAACAATGGCAAACGAAAATCTGCACTCTGTGTTAATGGATCCTTAGATGGCATTGCTTTCAGAGGCAAGGTTGTTTTGTGTGAGAGAGGAAAGGGTATAGGAAGAATAGCCAAAGGAGAGGAAGTGAAAAGAGTAGGTGGAGCCGCCATGATTCTGATGAATGATGAAGCCAATGGCTTTACTCTGTCAGCTGATGTACATGTTCTACCTGCAACGCATGTAAGCTATGCAACTGGAGTGAAAATCAAGGCCTATATAAATTCCACTGCAAAACCTACAGCAACCATTTTGTTTAAGGGAACTATTATCGGAAATTCCAAATCCCCTGAAGTTGCATCTTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCTGGTATTTTGAAACCAGATATCATTGGACCAGGCTCTGGCACATCAATGTCATGCCCACACCTTAGTGGCATTGCTGCATTGCTCAAAAGCTCTCATCCTCGTTGGTCACCAGCAGCAATAAAATCAGCCATAATGACTTCTGCAGACACACTAAATTTACAAAACAAACCCATTGTTGATGAAACACTTCAGCCTGCAGATCTCTTTGCAAAAGGTTCTGGCCACATGAATCCTTCAAGGGCTAATGATCCTGGATTAGTTTATGATATCCAACCTGATGATTATATACCTTATCTGTGTGGCTTAGGCTACAGCGATACGGAAGTTGGGATCCTTGCACATAGAAAAATTAAGTGCTCTGAGACTTCAAGCATTCCCGAAGGAAACCTCAACTACCCTTCGTTTTCTGTTGCGCTTGGTTCCTCACAGACATTCACAAGGACTGTGACAAATGTCGGTGAGGCCTATTCATCTTATGTTCTCATAGTTGCGGCACCAGAAGGGGTTGATGTGAAGGTCCAGCCAGATAAGCTTTATTTTTCTGAAGTGAACCAGAAAGAGACATATTCAGTGACATTCAGCCATACAGGGTTGGGTAATAAGACAGGGGAATATGCTCAAGGGTTTCTCAAATGGGTCTCTGCCAAACACACTGTAAGGAGCCCAATCTCGGTCAAATTCGTTTAG 2208 0.4466 MDYFLFITLTFFLSFHVHIAQGSELPTTTIESTETSSSKIYIIHVTEPEGRIKMFTEAEDLESWYHSFLPLTVKSSEEQPRVIYSYKNVLRGFAARLTQEELKDVEKKSGFISAHPERVLRRQTTHTSKFLGLQQENGLWKESNFGKGVIIGVLDSGITPGHPSFSDAGMPPPPPKWKGRCELNVTACNNKLIGARSFNLAAKATKGEKAEAPIDEDGHGTHTASTAAGAFVDYAEVLGNAKGTAAGVAPLAHLAIYKVCFGEDCPESDVLAGLDAAVEDGVDVISISLGRSKAHPFFDESTAIGAFAAIQKGIFVSCAAGNFGPFSSSLVNGAPWVLTVGASTIDRRIVATVKLGNGREFGGESVFQPTSFPPKLLPLAYAGNNGKRKSALCVNGSLDGIAFRGKVVLCERGKGIGRIAKGEEVKRVGGAAMILMNDEANGFTLSADVHVLPATHVSYATGVKIKAYINSTAKPTATILFKGTIIGNSKSPEVASFSSRGPNLPSPGILKPDIIGPGSGTSMSCPHLSGIAALLKSSHPRWSPAAIKSAIMTSADTLNLQNKPIVDETLQPADLFAKGSGHMNPSRANDPGLVYDIQPDDYIPYLCGLGYSDTEVGILAHRKIKCSETSSIPEGNLNYPSFSVALGSSQTFTRTVTNVGEAYSSYVLIVAAPEGVDVKVQPDKLYFSEVNQKETYSVTFSHTGLGNKTGEYAQGFLKWVSAKHTVRSPISVKFV* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2466 735 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 36 518 - -
Lja4g2466 735 Pfam Subtilase family 146 563 IPR000209 GO:0006508|GO:0008236
Lja4g2466 735 Pfam PA domain 388 464 IPR003137 -
Lja4g2466 735 SUPERFAMILY Subtilisin-like 123 593 IPR036852 GO:0004252|GO:0006508
Lja4g2466 735 Pfam Peptidase inhibitor I9 41 121 IPR010259 -
Lja4g2466 735 Gene3D - 606 734 - -
Lja4g2466 735 Gene3D - 346 487 - -
Lja4g2466 735 ProSiteProfiles Serine proteases, subtilase domain profile. 130 589 - -
Lja4g2466 735 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Lja4g2466 735 PRINTS Subtilisin serine protease family (S8) signature 519 535 IPR015500 -
Lja4g2466 735 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Lja4g2466 735 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 151 162 IPR023827 -
Lja4g2466 735 CDD Peptidases_S8_3 123 556 IPR034197 -
Lja4g2466 735 CDD PA_subtilisin_like 352 479 - -
Lja4g2466 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 122 IPR037045 -
Lja4g2466 735 Gene3D Peptidase S8/S53 domain 148 518 IPR036852 GO:0004252|GO:0006508
Lja4g2466 735 Gene3D Peptidase S8/S53 domain 519 602 IPR036852 GO:0004252|GO:0006508
Lja4g2466 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 519 732 IPR045051 -
Lja4g2466 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 518 IPR045051 -
Lja4g2466 735 Pfam Fibronectin type-III domain 636 732 IPR041469 -
Lja4g2466 735 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 519 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2466 Lja-Chr4 28822658 28825010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2466 32 734 Subtilisin-like Serine Gene Family AT1G04110 44.751 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2466 - - gmx:100785376 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2466 4 28822658 28825010 Lja4g2466 4 28822658 28825010 ECH
Lja4g2467 4 28829915 28832752 Lja4g2466 4 28822658 28825010 PCT