Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2450 ATGGCTCCTAGTTGTAGCAAAACCTTTTGTGATCATTCTTCACTTGTAAAAATCACCAAACGTCCTTCTCCACTTTTGCTGAAGGACTATCTGAGGGACGATCTGAGCTCGTGTTCATCTAGCGGTTTCAAATCGTTGCCGCGCCGACAATGCTGCACCACCGTTGGATTCTCTAGAGATCCGAAGCTCCAACGCAAGAAGAGGAACACGCTTCCTCGACAACAATCCAATTCTTCTTCTTCTTCAACCATGTCGTTAGCTCTTCAGAGAGCTTCTGAAGTTGTGATAAACGCAATAAAGTCACTGCCATTGAAGCAAAAGAGTGAGAACAAAGTGAAGAAAGGTGGTGTTGCTCTTTCTAGAAGCTTCTGGAGGAGGTTGTTGAGCAGAAGCTTCTGGAGAAAAGCGGCGGCGAAGGAAGACGGAAGTGGAGGTGTCTCAAAGAGATGTTCATTTCGCGAGCTACTACTGAAGGAACGGGATTATCACAAAACGATGTCGTTGGATGAGGAGACCACGACGACAACGCTCACTGCCACCACGAGTTCAGGTAGTGGTAGTAATAATGATAGCTGGGGGGAGAGCGATTTCACTTTTTGTGATAGCTCCACGGAAAATGACGCCAAAGAGGAAGAGGATGCGCCACGCCATAAGATAGAAGGAATCAAAACCGTGGATTGGCCATGTGAGAAGGAACAATTCAGTCCAGTATCTGTGCTAGATTTCCCATTTGAAGATGAACAAGTGATGAAGCCCCATTTAAATTCCACAGGAGCCAAACACAAGCATATGCAAAAGAGACGACATTTTAGAAGTGTATCTTCACTGAAGCCTGTGGCTTTAGAGAAAAGGATCGCACGTTCAGAACTAGATGATATTGCACTACATAATAATAACCATTCTGCAAACAAATGTTCAAACAACGTTAATGACAATGCCCGGGACCTTGTTAGCTTCATGAAAACCTCAATTCCTTACAATTGTTTGATTTTTGAGGCAGAGAACCTGCTATTTGACTACTTCAAGCAGAGCATAGGGGAGAATGATAATAATAACAACGACATTGATCATTCGAAGAAGCTTCAACTTTGCGAGGTAGCTGAGGATTGGATAAGAGGGCAGCCCAAAGAAGTGTATTTGGGTTGGGAAGTGAAAGAAAGAAGAGGGGTTTACATTAGGGAGATGGACAAGTGCGAGGAATGGAAAAATTACTCTGATGGAGAAACACAACAATTGGTTCTGGAGCTGGAAAACGAGGTGTTTGCTAGTTTGATTAACGAGGTTGTGCTTGACCTCGCTACATGA 1305 0.4398 MAPSCSKTFCDHSSLVKITKRPSPLLLKDYLRDDLSSCSSSGFKSLPRRQCCTTVGFSRDPKLQRKKRNTLPRQQSNSSSSSTMSLALQRASEVVINAIKSLPLKQKSENKVKKGGVALSRSFWRRLLSRSFWRKAAAKEDGSGGVSKRCSFRELLLKERDYHKTMSLDEETTTTTLTATTSSGSGSNNDSWGESDFTFCDSSTENDAKEEEDAPRHKIEGIKTVDWPCEKEQFSPVSVLDFPFEDEQVMKPHLNSTGAKHKHMQKRRHFRSVSSLKPVALEKRIARSELDDIALHNNNHSANKCSNNVNDNARDLVSFMKTSIPYNCLIFEAENLLFDYFKQSIGENDNNNNDIDHSKKLQLCEVAEDWIRGQPKEVYLGWEVKERRGVYIREMDKCEEWKNYSDGETQQLVLELENEVFASLINEVVLDLAT* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2450 434 PANTHER OS04G0572500 PROTEIN 13 432 - -
Lja4g2450 434 PANTHER OS04G0572500 PROTEIN 13 432 - -
Lja4g2450 434 MobiDBLite consensus disorder prediction 169 193 - -
Lja4g2450 434 MobiDBLite consensus disorder prediction 70 84 - -
Lja4g2450 434 MobiDBLite consensus disorder prediction 167 193 - -
Lja4g2450 434 MobiDBLite consensus disorder prediction 62 84 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2450 20 433 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 29.957 2.07e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2450 - - lja:Lj4g3v1329140.1 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2450 4 28555547 28559900 Lja4g2450 4 28555547 28559900 ECH